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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g230170.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | G2-like | ||||||||
Protein Properties | Length: 332aa MW: 36957.9 Da PI: 4.9531 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 61.1 | 2.3e-19 | 58 | 111 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r +W + LH++F++a+++ G +kA Pk+il +m+ + Lt+++v+SH QkYR+ Pd.00g230170.m01 58 KKRFKWKNSLHDKFLRAIAHS-GFDKAKPKKILAFMNEPNLTISQVASHWQKYRI 111 68******************9.********************************6 PP | |||||||
2 | Myb_DNA-binding | 32.2 | 2.5e-10 | 62 | 110 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 +W +++++++a++ G + +k+I + m+ ++t q+ s+wqky+ Pd.00g230170.m01 62 KWKNSLHDKFLRAIAHSGFDkaKPKKILAFMNePNLTISQVASHWQKYR 110 799*********************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 332 aa Download sequence |
MASKSVSIVA LLFSVLILCL LGTYADLIQG WEEGGFGNGN WDGQGYGDDE ERTAAPRKKR 60 FKWKNSLHDK FLRAIAHSGF DKAKPKKILA FMNEPNLTIS QVASHWQKYR IFLKEKDAAA 120 GDEDELERLR RSSFARERLS RSVGSTFQVQ PSAGIGSTLP LTAAASNSHG SIPPLIRSGQ 180 SSLLNNNPAN FPRQQPTLGN RHGDQLVFQE NRPAAFGMQQ PSNNFEYGGN VENSNGYLHG 240 IFMMLLPDEQ DNYQPPSQQQ DGGHDQLPYQ VEVPDPATSQ VPNLSADQVP NPGPYHVEDN 300 ALNETNHTWF SYLSEDIWDA DIWEDGIRDV DT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 57 | 86 | RKKRFKWKNSLHDKFLRAIAHSGFDKAKPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07210.1 | 8e-19 | ARR-B family protein |