PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g226950.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 230aa MW: 26761.6 Da PI: 4.8785 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 60.4 | 5.9e-19 | 22 | 73 | 2 | 54 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkae 54 pGfrFhPtdeelv +yL++kve+k +++ e ik++diyk++PwdLp+ ++++ Pd.00g226950.m01 22 LPGFRFHPTDEELVEFYLRRKVEKKAISI-ELIKSIDIYKHDPWDLPNIHRSS 73 59***************************.89***************532222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MDSNYTSTKD DHQYIDEDDV QLPGFRFHPT DEELVEFYLR RKVEKKAISI ELIKSIDIYK 60 HDPWDLPNIH RSSNTKNINS TDPQQEAEIW TLCRIFKRNV SYKKYTADWR GLSGAKRHPM 120 DTVSSKKCTS DQDDLDQSNN YISFGASDNI ICYEEKKPVV NHTNMNNFNG SNQQLHAVGQ 180 LSSNMPATYP YMETFANFSY QDLENELLNE NWDELRSAAV HLAFDPTFLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43000.1 | 2e-23 | NAC family protein |