PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g220940.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YA
Protein Properties Length: 341aa    MW: 37969.6 Da    PI: 8.8269
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g220940.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.61.8e-32184240158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       d p+YVNaKQy++Il+RRq+Rakle+++kl  k+rkpylheSRh hAl+R RgsgGrF
  Pd.00g220940.m02 184 DGPIYVNAKQYHGILRRRQSRAKLEAQNKL-LKARKPYLHESRHLHALNRVRGSGGRF 240
                       57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MPYQIPKDSL IELSMPTQNL DKKFFSQSSV QSIPLYTSNC MSWNPIEREI PQSSSKDASF  60
KVEFTPQVRH DAKHLGLQLL PDQGSSSTTQ TISQSQDRCN SSESGEDEIC AKGVEGQMKP  120
VYLLNNLDLM SNPSQVGYGN LMGRVPYPYA DPYFSGFLAA YGPQAMPQMI APTRVPLPLD  180
LAEDGPIYVN AKQYHGILRR RQSRAKLEAQ NKLLKARKPY LHESRHLHAL NRVRGSGGRF  240
LSTKRLQQSD QNPSSSTHDV LDSVNLHQKD TQDTESHHLG SSEFVTAVAT HSDIASVSHT  300
NDIFRQQDRR FSGIPSHMGG AMQFRGGLMR AGTQHCASVV R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.12e-51NF-YA family protein