PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g219520.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 424aa MW: 46954.6 Da PI: 7.2331

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g219520.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	116.5	2.7e-36	46	188	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk... 79 lp+G++F+Ptd+el+ e+L++kvegk+ + + +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ Pd.00g219520.m01 46 LPAGVKFDPTDQELI-EHLEAKVEGKDtkshplI---DefipTIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKIQtec 133 799**********.99*****6665443...133333666646******.555666799**************733345 PP NAM 80 .....sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l Pd.00g219520.m01 134 dlqggETRWHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 188 55544778********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MNKSNLGSIR SSDLIDAKLE EHQMCGSKQC PGCGHKLEGK PDWLGLPAGV KFDPTDQELI 60 EHLEAKVEGK DTKSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLSRH FFHRPSKAYT 120 TGTRKRRKIQ TECDLQGGET RWHKTGKTRP VMVNGKQKGC KKILVLYTNF GKNRKPEKTN 180 WVMHQYHLGQ HEEEKEGELV VSKIFYQTQP RQCNWSDRAS ATTGEGSSDI VPANSRRDSG 240 SGSCSSKEII PPHSHREHDQ MSAVASGVAA AAPISSYSAM DIHQLKSDHF SFAPFRKSFD 300 EVGIGGEAST AREGPASGTC EEMRGEHHHQ RSLSTSAVLH IPFPPSSLHL LSITPPSFLT 360 KTLTLESCSK MKISRSASGL EELIMGCTSS SNVKEESSMP NPQEAEWMKY SSFWPDPDNP 420 DHHG

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MNKSNLGSIR SSDLIDAKLE EHQMCGSKQC PGCGHKLEGK PDWLGLPAGV KFDPTDQELI  60
EHLEAKVEGK DTKSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLSRH FFHRPSKAYT  120
TGTRKRRKIQ TECDLQGGET RWHKTGKTRP VMVNGKQKGC KKILVLYTNF GKNRKPEKTN  180
WVMHQYHLGQ HEEEKEGELV VSKIFYQTQP RQCNWSDRAS ATTGEGSSDI VPANSRRDSG  240
SGSCSSKEII PPHSHREHDQ MSAVASGVAA AAPISSYSAM DIHQLKSDHF SFAPFRKSFD  300
EVGIGGEAST AREGPASGTC EEMRGEHHHQ RSLSTSAVLH IPFPPSSLHL LSITPPSFLT  360
KTLTLESCSK MKISRSASGL EELIMGCTSS SNVKEESSMP NPQEAEWMKY SSFWPDPDNP  420
DHHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-167	NAC family protein