PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g208290.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 191aa MW: 22521.3 Da PI: 5.4532 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 56.3 | 1.1e-17 | 5 | 137 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkk.....leleevikevdi..ykvePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyWk 84 GfrF+Ptd+e++ ++L k v +++ + ++vi+++++ +k eP+++ + + + +++++yf s+ +++ g r + + + g+W+ Pd.00g208290.m01 5 LGFRFDPTDQEIIGFFLYKMVVTNNpltsmPPYNKVIHKCNLfgNKREPSEIWRDYGGdqlDDQDLYFVSELQRN---GLRIQTkTGRCGTWS 94 6*******************9888878886566678****9833577*****75333222366688888888775...44544414568**** PP NAM 85 atgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +t + ++v+++ +e +g k + + +g++++ ++ W+++ey+l Pd.00g208290.m01 95 ETETYQDVKDEVDEIIGRKGKFRYENGNTSE-DHAGWLLDEYSL 137 ***********99***********9988888.89********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence |
MTQLLGFRFD PTDQEIIGFF LYKMVVTNNP LTSMPPYNKV IHKCNLFGNK REPSEIWRDY 60 GGDQLDDQDL YFVSELQRNG LRIQTKTGRC GTWSETETYQ DVKDEVDEII GRKGKFRYEN 120 GNTSEDHAGW LLDEYSLFEK GCKNRTSRNC YDFDVVICRL RRKCNMDGQV REKEEVLISR 180 SIKQEDEKRS I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10490.1 | 3e-06 | NAC family protein |