PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g207710.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 276aa    MW: 31178.8 Da    PI: 8.4313
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g207710.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B399.61.9e-3131135199
                       EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.g 86 
                       f+kv tpsdv+k++rlv+pk++ae++         + ++  l ++d++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++  g
  Pd.00g207710.m01  31 FDKVVTPSDVGKLNRLVIPKQHAERYfpldstA--NDKGLLLNFQDRTGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFERGvG 121
                       89*************************999643..346779************************************************6658 PP

                       S.SEE..EEEEE-S CS
                B3  87 r.sefelvvkvfrk 99 
                       +  + +l++ ++r+
  Pd.00g207710.m01 122 DsGKDRLYIDWRRR 135
                       88999999999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MDLSLNQEQA AADGANNNNN WPPNSEREHM FDKVVTPSDV GKLNRLVIPK QHAERYFPLD  60
STANDKGLLL NFQDRTGKPW RFRYSYWNSS QSYVMTKGWS RFVKEKKLDA GDIVSFERGV  120
GDSGKDRLYI DWRRRPPPPP PPHHHHHGQF VERDQVVHHQ YPMVIDSVPF VQHGKMSSSG  180
ASAGTSTGKR LRLFGVNMEC SPNIEEDQTD EHQYQILPST AIPYNHLPSS SFSAPLELRL  240
PNTIGANQIP LPNTGAADPY LSKKGKSTSL SFYLDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.18e-68B3 family protein