PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g198810.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 255aa MW: 29144.7 Da PI: 5.5214 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 154.1 | 6.1e-48 | 4 | 135 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 lppG+rF Pt+eelv++yL +k+egk+ ++ +vi+ vdiy+ ePwdLpk +++++++w+fF++r++++a+g r+nr+t+sgyWkatg+ Pd.00g198810.m01 4 LPPGYRFYPTEEELVSFYLLNKLEGKRDDTRRVIPVVDIYSKEPWDLPKfsgeLCHGDTEQWFFFTPRQQREAQGGRPNRTTASGYWKATGSP 96 79****************************99****************656754445777********************************* PP NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 v+s++++++g+kkt+vfykg+ap+g+kt+W m+eyr+ Pd.00g198810.m01 97 GYVYSSDNKVIGMKKTMVFYKGKAPTGRKTKWKMNEYRA 135 *************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MEELPPGYRF YPTEEELVSF YLLNKLEGKR DDTRRVIPVV DIYSKEPWDL PKFSGELCHG 60 DTEQWFFFTP RQQREAQGGR PNRTTASGYW KATGSPGYVY SSDNKVIGMK KTMVFYKGKA 120 PTGRKTKWKM NEYRAIEADN PTTTTTTTSV PKYLRNEFRL CRVYVVSGSC RAFDRRPLEG 180 GGETKHQLSE SMGETSTFSL KAPVVEKASS SDETYSYSGE LGDLPETFAG INSTSWEIIE 240 GLEQPLWEWE QLNLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 2e-90 | NAC family protein |