PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g198460.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NF-YB | ||||||||
Protein Properties | Length: 169aa MW: 18436.9 Da PI: 9.8124 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 41.8 | 2.7e-13 | 8 | 97 | 5 | 88 |
NF-YB 5 drflPianvsrimkkvlPanak......iskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylk 88 ++lP a v r++k l + +k + k+a e + fi ++++ a+d c+++kr+ti++dd+l al ++ f ++++pl++ lk Pd.00g198460.m01 8 AEELPKAIVRRVVKDKLSQCSKgdgdltLHKEALLAFSESARIFIHYLSATANDICKEKKRQTISADDVLKALEEIEFSEFIKPLEASLK 97 5789************9987773344335677777889***********************************************98876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence |
MAKVVAEAEE LPKAIVRRVV KDKLSQCSKG DGDLTLHKEA LLAFSESARI FIHYLSATAN 60 DICKEKKRQT ISADDVLKAL EEIEFSEFIK PLEASLKGKN PGKNAGKNPG KNAGKNAEKS 120 GGKNAGGKQK AGTSKAKEVK KKRKLEEPSS RKLKEKEEDN QDENGSDDE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 140 | 145 | KKKRKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27470.1 | 5e-41 | NF-YB family protein |