PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g195780.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 399aa MW: 45630.5 Da PI: 9.3035

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g195780.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	46	9.6e-15	92	178	2	96
EEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 +k +++s+v++ ++l+lpk+f+ h ++tltle esg+++++ + +++ +l++GWk+F a++L++gD +v++l++ +f + Pd.00g195780.m01 92 VKSMIHSNVSSWNCLTLPKQFCHLHlP---LYDTTLTLEVESGEKYRIIF--LAGKR--ILSAGWKKFRTAHKLRVGDLLVLRLVRPLKF--K 175 6899****************66642...45679***********..55543..69********************9986666..4 PP EEE CS B3 94 vkv 96 v + Pd.00g195780.m01 176 VYI 178 444 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MAHEELAVAT QELEVKQREP WKTKKNVLNT RRSPLSSTHM TKRKVPGDPR KHGGCKRKRT 60 MVDNFNEHEK SSASTQVEEI QAILGAEYPI VVKSMIHSNV SSWNCLTLPK QFCHLHLPLY 120 DTTLTLEVES GEKYRIIFLA GKRILSAGWK KFRTAHKLRV GDLLVLRLVR PLKFKVYIMG 180 RHNLAEVDAA FSLLKLNACA KHEVLEENHP KPLSRDVCQG NIRKTSLMLD TKPELIDNQT 240 EEDNEEFGSK FPGGIRYPVP AADFEDVRSI ENFTILVNGV TIDSWLSKQL RTNYYDLCSS 300 QGSFLHDHLL KSINTKLAAE IITETTNIAN AIRARKLSAS HADYEMWEKT LNAFELLGMD 360 VGFLHERLKR LLSLSFRSEE AVELKRREDK VEQICARGR

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MAHEELAVAT QELEVKQREP WKTKKNVLNT RRSPLSSTHM TKRKVPGDPR KHGGCKRKRT  60
MVDNFNEHEK SSASTQVEEI QAILGAEYPI VVKSMIHSNV SSWNCLTLPK QFCHLHLPLY  120
DTTLTLEVES GEKYRIIFLA GKRILSAGWK KFRTAHKLRV GDLLVLRLVR PLKFKVYIMG  180
RHNLAEVDAA FSLLKLNACA KHEVLEENHP KPLSRDVCQG NIRKTSLMLD TKPELIDNQT  240
EEDNEEFGSK FPGGIRYPVP AADFEDVRSI ENFTILVNGV TIDSWLSKQL RTNYYDLCSS  300
QGSFLHDHLL KSINTKLAAE IITETTNIAN AIRARKLSAS HADYEMWEKT LNAFELLGMD  360
VGFLHERLKR LLSLSFRSEE AVELKRREDK VEQICARGR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	42	59	KRKVPGDPRKHGGCKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42700.1	4e-21	B3 family protein