PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g195760.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 411aa MW: 46228.2 Da PI: 8.2924

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g195760.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.6	2.3e-18	101	190	2	99
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 +kv++ps+v+ +l lpkkf+ +h ++++++++lede+g+++e k+ + + l++GW++F a++L egD+v+F+++ s+f +v Pd.00g195760.m01 101 LKVMLPSHVTGCFWLGLPKKFCCDHL--PKQDTMIVLEDENGKEFETKY--LAEK--VGLSGGWRGFSMAHKLLEGDIVIFHVVTPSKF--KV 185 699*****************8884..347889***********..4444..55*********************8876888..88 PP EEE-S CS B3 95 kvfrk 99 ++r+ Pd.00g195760.m01 186 YIIRS 190 88876 PP

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence
MAVLQNQKHS SSSDPPPPSK SNRGRVPKNK EKLFSKKSSC LTQSQMTKSI VVSANPKMPE 60 SRKWKRATVE SLYDTSQAQS SVLERAKEVE ASLDPKFPTL LKVMLPSHVT GCFWLGLPKK 120 FCCDHLPKQD TMIVLEDENG KEFETKYLAE KVGLSGGWRG FSMAHKLLEG DIVIFHVVTP 180 SKFKVYIIRS NGLDEADCAV GLMRLDACIK QMDTGHIISC EREESGNLEP IPEDHAIAFN 240 TKSRPLSDQS ENDSEDLGFE VLDGLRLSES VVPFKEMYCM DNFNVLVNGL NINSEFSKYI 300 LNKYYELCCS QNSFLHEHLL EGLNCKLIVG VISETINIAD AIRACKITTS EGYFSTWNKT 360 LIAFEGLGMN VRFLRARLDQ LAILASKSKR FKEARLEELR GKAFGRKRGH K

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence

MAVLQNQKHS SSSDPPPPSK SNRGRVPKNK EKLFSKKSSC LTQSQMTKSI VVSANPKMPE  60
SRKWKRATVE SLYDTSQAQS SVLERAKEVE ASLDPKFPTL LKVMLPSHVT GCFWLGLPKK  120
FCCDHLPKQD TMIVLEDENG KEFETKYLAE KVGLSGGWRG FSMAHKLLEG DIVIFHVVTP  180
SKFKVYIIRS NGLDEADCAV GLMRLDACIK QMDTGHIISC EREESGNLEP IPEDHAIAFN  240
TKSRPLSDQS ENDSEDLGFE VLDGLRLSES VVPFKEMYCM DNFNVLVNGL NINSEFSKYI  300
LNKYYELCCS QNSFLHEHLL EGLNCKLIVG VISETINIAD AIRACKITTS EGYFSTWNKT  360
LIAFEGLGMN VRFLRARLDQ LAILASKSKR FKEARLEELR GKAFGRKRGH K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	2e-40	B3 family protein