PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g192340.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YA
Protein Properties Length: 325aa    MW: 36096.4 Da    PI: 9.0748
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g192340.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.71.7e-32168224158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       d p+YVNaKQy++Il+RRq+Rakle+++kl  k+rkpylheSRh hAl+R RgsgGrF
  Pd.00g192340.m01 168 DGPIYVNAKQYHGILRRRQSRAKLEAQNKL-LKARKPYLHESRHLHALNRVRGSGGRF 224
                       57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MPTQNLDKKF FSQSSVQSIP LYTSNCISWN PIEREIPQSS SKDASFKVEF TPQVRHDAKH  60
LGLQLLPDQG SSSTTQTISQ SQDRCNSSES GEDEICGKGV EGQMKPVYLL NNLDLMSNPS  120
QVGYGNLMGR VPYPYADPYF SGFLAAYGPQ AMMIAPTRVP LPLDLAEDGP IYVNAKQYHG  180
ILRRRQSRAK LEAQNKLLKA RKPYLHESRH LHALNRVRGS GGRFLSTKRL QQSDQNPSSS  240
THDVLDSVNL HQKDTQDTES HHLGSSEFVT AVATHSDIAS VSHTNDIFRQ QDRRFSGIPS  300
HMGGAMQFRG GLMRAGTQHC ASVVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.14e-50NF-YA family protein