PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g188350.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 764aa MW: 84600.8 Da PI: 4.4772

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g188350.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	92.3	8e-29	68	146	50	129
NAM 50 kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 + ++++ +wyfF++r+kky++g+r +rat+ gyWk+tgkd++vl +ge+vg ktL+f++grap+g +t+Wvmheyrle Pd.00g188350.m01 68 CWESGDLKWYFFCPREKKYRNGNRIQRATEGGYWKTTGKDRSVLY-SGEVVGWIKTLIFHTGRAPRGDRTNWVMHEYRLE 146 4456777************************************.999***************************85 PP
2	NAM	87.7	2.1e-27	396	470	54	129
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++ +wyfF++r+kky++g+r +rat+ gyWk+tgkd++vl +g+ vg ktL+f++grap+g +t+Wvmheyrle Pd.00g188350.m01 396 GDLKWYFFCPREKKYRSGNRIQRATEGGYWKTTGKDRSVLY-SGAIVGWIKTLIFHTGRAPSGDRTNWVMHEYRLE 470 5669***********************************.999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 764 aa Download sequence
MSVSGLLFIA LIALKNLGGR LTAINQFAHR LFLPFNLVLH FRVFILHPMS FDHNKEHSSI 60 IIAFCKSCWE SGDLKWYFFC PREKKYRNGN RIQRATEGGY WKTTGKDRSV LYSGEVVGWI 120 KTLIFHTGRA PRGDRTNWVM HEYRLEDQGL ADRGVPLDSY VICMIFQKDG LGPKIGAQYG 180 APFKEEDWTD DEAEICSEAI AHENMCEPNL VVPSNCNSSI TTSGHSPKGI HTSPSESCIS 240 DVLPPSCNIH QLVSSNHVTM EKLHGSDDDI LSMLNCFTEG STSLMKENDK NEELGNVIPS 300 GNAGATPNFN SDDIYEDLGD LGKMARVSED GYNFSSVHNS ICAPAQMPLG GNEQFLELDD 360 LSCVLSSLVV CSCFSTSFSI LGPSFCTRYK SCWDCGDLKW YFFCPREKKY RSGNRIQRAT 420 EGGYWKTTGK DRSVLYSGAI VGWIKTLIFH TGRAPSGDRT NWVMHEYRLE DQGLADRGVP 480 LDSYVLCMIF QKEGLGPRIG AQYGAPFKEE DWSDDEVEIT SEAVQVAITP EPDLGLPCNY 540 VSPTATNAHS VGDIGVGPSG SGIYDILPPF CEVSQPVSSN YVTLEMPLAS VGDDIISMFD 600 CFTEESALYT DEPKKVEAEG HLETVQNANM PSTHSPEVIG VGPSFESCGF DVLPPCNVNE 660 SFVTVENPPA SNGDETLPIM DCFAEESVFL VNDNGKNEEL NNLEHLGNAT PHFNTSNIYE 720 DLGDLENLGR VGVVGYNFCS EPDSRSHFLE LYDLDQPQHP NLFF

Sequence ? help Back to Top

Protein Sequence Length: 764 aa Download sequence

MSVSGLLFIA LIALKNLGGR LTAINQFAHR LFLPFNLVLH FRVFILHPMS FDHNKEHSSI  60
IIAFCKSCWE SGDLKWYFFC PREKKYRNGN RIQRATEGGY WKTTGKDRSV LYSGEVVGWI  120
KTLIFHTGRA PRGDRTNWVM HEYRLEDQGL ADRGVPLDSY VICMIFQKDG LGPKIGAQYG  180
APFKEEDWTD DEAEICSEAI AHENMCEPNL VVPSNCNSSI TTSGHSPKGI HTSPSESCIS  240
DVLPPSCNIH QLVSSNHVTM EKLHGSDDDI LSMLNCFTEG STSLMKENDK NEELGNVIPS  300
GNAGATPNFN SDDIYEDLGD LGKMARVSED GYNFSSVHNS ICAPAQMPLG GNEQFLELDD  360
LSCVLSSLVV CSCFSTSFSI LGPSFCTRYK SCWDCGDLKW YFFCPREKKY RSGNRIQRAT  420
EGGYWKTTGK DRSVLYSGAI VGWIKTLIFH TGRAPSGDRT NWVMHEYRLE DQGLADRGVP  480
LDSYVLCMIF QKEGLGPRIG AQYGAPFKEE DWSDDEVEIT SEAVQVAITP EPDLGLPCNY  540
VSPTATNAHS VGDIGVGPSG SGIYDILPPF CEVSQPVSSN YVTLEMPLAS VGDDIISMFD  600
CFTEESALYT DEPKKVEAEG HLETVQNANM PSTHSPEVIG VGPSFESCGF DVLPPCNVNE  660
SFVTVENPPA SNGDETLPIM DCFAEESVFL VNDNGKNEEL NNLEHLGNAT PHFNTSNIYE  720
DLGDLENLGR VGVVGYNFCS EPDSRSHFLE LYDLDQPQHP NLFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64060.1	9e-63	NAC family protein