PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g186270.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ARR-B

Protein Properties

Length: 615aa MW: 68950.2 Da PI: 6.1176

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g186270.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	76	4.9e-24	199	252	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ +LH++Fv+av+q+ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl Pd.00g186270.m01 199 KARVVWSVDLHQKFVKAVHQI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 252 68*****************.9*****************************8 PP
2	Myb_DNA-binding	39.4	1.4e-12	201	251	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ ++++++v+av+q G + +k+I m+ +t++++ s++qky+ Pd.00g186270.m01 201 RVVWSVDLHQKFVKAVHQIGFDkvGPKKILDLMNvPWLTRENVASHLQKYR 251 678***********************************************7 PP
3	Response_reg	81.4	2.9e-27	19	127	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 vl+vdD+p+ +++l+++l+k y ev+++ +++al+ll+ek+ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ Pd.00g186270.m01 19 VLVVDDDPTWLKILEKMLKKCSY-EVTTCGLARDALNLLREKKdgYDIVVSDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQ 109 89*******************.***********999999******************6644.8**************** PP TTESEEEESS--HHHHHH CS Response_reg 92 aGakdflsKpfdpeelvk 109 Ga d+l Kp+ ++el++ Pd.00g186270.m01 110 HGACDYLLKPIRMKELRN 127 *************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 615 aa Download sequence
MDSSFSSPRN DSFPAGLRVL VVDDDPTWLK ILEKMLKKCS YEVTTCGLAR DALNLLREKK 60 DGYDIVVSDV NMPDMDGFKL LEHVGLEMDL PVIMMSVDGE TSRVMKGVQH GACDYLLKPI 120 RMKELRNIWQ HVFRKKIHEI RDIESHESIE GIQLIRNGSD QYDEGYFFSA EDLTSSRKRK 180 DVDNKYDDKD FSDCSSTKKA RVVWSVDLHQ KFVKAVHQIG FDKVGPKKIL DLMNVPWLTR 240 ENVASHLQKY RLYLSRLQKD DIKSSFGGTK HSDYSSKDLQ GILSVQNSIN IQQNDVAHGS 300 YRFSGNNLVA QNADPKSNEG DIKGIVSEPV AEPKKGTTGN IPDSQKTRSS QMDFNSSYAE 360 TKKGLVGNVP DSQKIRSSQM RVNHSFASVE SEVNLMAFDS TIPTTYSWNQ IQLEKEHKPL 420 IQLNNGFSKP PLPGPQHHFQ ADQLQSIPSI SSRPSIPGGD VTGSSKSKPS YSEYTNHHGS 480 RVSPTRSPTV SATDSFPGQT KSCVVDHQVS ETISTSTSNI KNQGINLSTD LESAQRNLIL 540 GSTSPFASLD DEFQICWYQG DCYGMNLELQ NVEFSEYTDP THVTEVPAHL YDALRFEYPC 600 DPSEYSVLDQ GLFIA

Sequence ? help Back to Top

Protein Sequence Length: 615 aa Download sequence

MDSSFSSPRN DSFPAGLRVL VVDDDPTWLK ILEKMLKKCS YEVTTCGLAR DALNLLREKK  60
DGYDIVVSDV NMPDMDGFKL LEHVGLEMDL PVIMMSVDGE TSRVMKGVQH GACDYLLKPI  120
RMKELRNIWQ HVFRKKIHEI RDIESHESIE GIQLIRNGSD QYDEGYFFSA EDLTSSRKRK  180
DVDNKYDDKD FSDCSSTKKA RVVWSVDLHQ KFVKAVHQIG FDKVGPKKIL DLMNVPWLTR  240
ENVASHLQKY RLYLSRLQKD DIKSSFGGTK HSDYSSKDLQ GILSVQNSIN IQQNDVAHGS  300
YRFSGNNLVA QNADPKSNEG DIKGIVSEPV AEPKKGTTGN IPDSQKTRSS QMDFNSSYAE  360
TKKGLVGNVP DSQKIRSSQM RVNHSFASVE SEVNLMAFDS TIPTTYSWNQ IQLEKEHKPL  420
IQLNNGFSKP PLPGPQHHFQ ADQLQSIPSI SSRPSIPGGD VTGSSKSKPS YSEYTNHHGS  480
RVSPTRSPTV SATDSFPGQT KSCVVDHQVS ETISTSTSNI KNQGINLSTD LESAQRNLIL  540
GSTSPFASLD DEFQICWYQG DCYGMNLELQ NVEFSEYTDP THVTEVPAHL YDALRFEYPC  600
DPSEYSVLDQ GLFIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	1e-136	ARR-B family protein