PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g186210.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 515aa    MW: 57249.2 Da    PI: 6.4644
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g186210.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS362.65.5e-1111465151374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetseknsseelaalklfsevsPilk 92 
                       lv++L++cAeav+ +d++ a++lL +l+ +a   g+++qR+a++f+++L+ rla  +  + +  + p ++s+  s+e+  al+l +e++P ++
  Pd.00g186210.m01 146 LVQQLIACAEAVACRDKAHASTLLYELRANAKVFGTSFQRVASCFVQGLSDRLALvQPLGAVGVIGPITKSTAFSAEKDGALHLVYEICPQIQ 238
                       689***************************************************9333344555556666656699999************** PP

              GRAS  93 fshltaNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnv 180
                       f+h++aN  Ilea+ege+ vH+iD++++    +G QW +L+++La+ + ++ ++lRiTgvg+    s+e+l+++g+ L+  A++++++fef++
  Pd.00g186210.m01 239 FGHFVANASILEAFEGESSVHVIDLGMTlgvpHGYQWRNLIDSLANHAgQPLHHLRITGVGN----SAERLQAIGNDLKLHAQSMKLNFEFSA 327
                       ************************98653333889***********9955557*********....9************************** PP

              GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdslea 273
                        v++++e+l+++++++  gE+l++n++lqlh l++es    +   +vL+++ +lsPk++++veq+++hn++ Fl rf+eal+ ysa+fdsl+a
  Pd.00g186210.m01 328 -VESSFENLKPQDFNLVDGEVLVINSILQLHCLVKESRGALN---SVLQTLHQLSPKLMILVEQDTSHNGPFFLGRFMEALHNYSAIFDSLDA 416
                       .799******************************88877777...8*********************************************** PP

              GRAS 274 klpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366
                        lp+ +  r+k+E++++g+ei+n+v+ceg +r+erhe++e+Wr+r+++aGF+ +pl+    +qa   l+    +gy+v e++g+lvlgWk++p
  Pd.00g186210.m01 417 MLPKYDTRRAKMEQFYFGEEIKNIVSCEGPARVERHERVEQWRRRMRRAGFQLAPLKMI--AQAMKWLEINTCEGYTVVEDKGCLVLGWKSKP 507
                       ********************************************************865..5777777777778******************* PP

              GRAS 367 LvsvSaWr 374
                       ++++S+W+
  Pd.00g186210.m01 508 IIATSCWK 515
                       *******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 515 aa     Download sequence    
MASGLYVQAE FYGDNTSDEV IGLDLNLSSM ACLPYPSSLS TLEENPAAWV IPFIDETTSH  60
KRLKQQHSAS HEFNNAGINY YSLYSGSGSM CARGLDSLPR IHFRDHISAY TRRYLAVEAM  120
EEATATLMRG KEGESEEEGR GDGTKLVQQL IACAEAVACR DKAHASTLLY ELRANAKVFG  180
TSFQRVASCF VQGLSDRLAL VQPLGAVGVI GPITKSTAFS AEKDGALHLV YEICPQIQFG  240
HFVANASILE AFEGESSVHV IDLGMTLGVP HGYQWRNLID SLANHAGQPL HHLRITGVGN  300
SAERLQAIGN DLKLHAQSMK LNFEFSAVES SFENLKPQDF NLVDGEVLVI NSILQLHCLV  360
KESRGALNSV LQTLHQLSPK LMILVEQDTS HNGPFFLGRF MEALHNYSAI FDSLDAMLPK  420
YDTRRAKMEQ FYFGEEIKNI VSCEGPARVE RHERVEQWRR RMRRAGFQLA PLKMIAQAMK  480
WLEINTCEGY TVVEDKGCLV LGWKSKPIIA TSCWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.14e-63GRAS family protein