PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g183820.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CPP

Protein Properties

Length: 848aa MW: 93202.1 Da PI: 5.5997

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g183820.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	49.7	7.5e-16	497	535	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+CnCkkskClk+YCeCfaag++C e C+C++C+Nk Pd.00g183820.m02 497 SCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQECFNKP 535 689**********************************96 PP
2	TCR	50.4	4.4e-16	582	620	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce+CkN Pd.00g183820.m02 582 RHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNA 620 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 848 aa Download sequence
MDTPERNQIG TPKAKFEDSP VFNYINSLSP IKPVKSVHIT QTFSSLSFAS LPSVFTSPHV 60 SAHKESRFLR RHNTSDPSKP ESSLESGNKV SANEDPAQLY INSEELREDC VPGVSTGEDS 120 VEPSSEHSKF VIELPRNLKY DCGSPDCRPT TSCGTEAHCE LEVADLSAPL VPYVQKTSEE 180 GSSNDEAHLQ IICQTLQRKE GTGCDWESLI SDAADLLIFD SPNGTEAFKG LMQNSLDPAT 240 RFCTSLAPQL TQNDVNDEQN VQVLDIVGSG GQLETEDPSS QYGEASQLER TEQMEDHLNN 300 CMVSSQSEKE DNKVETPMQF NCKPAVLNLQ RGLRRRCLDF EMAGARRKSL DNVSNSSSNM 360 LSQSDEKITT NDKQLVPMKP GGESSRCILP GIGLHLNALA KTSKDYKIIK CESLAYGRQL 420 SLPNSTADIH SPTGGQGPGH ESFSSASSER DMDGTENGVQ LAHDASQEPA FLANEEFNQN 480 SPKKKRRRFE HAGETESCKR CNCKKSKCLK LYCECFAAGV YCIEPCSCQE CFNKPIHEDT 540 VLATRKQIES RNPLAFAPKV IRSSDSVPEL GEESSKTPAS ARHKRGCNCK KSSCLKKYCE 600 CYQGGVGCSI SCRCEGCKNA FGRKDGSFIG TEAELDEEEA EACEKSVAEK HQQKIEIQKN 660 EEQRLDSALP TTPLRLSRQM VSLPFSSKNK PPRSSVFSIG GSCSGLYTSQ KLGKPNILRP 720 ESKFERHSQT VPEDEMPEIL QGDGSPSTGV KTASPNSKRV CPPNSDFGPS PGRRTGAAPA 780 HPPPMERLYD QGPPPFLTKT YDIADDPATN LIVSCSRYNN SFVVLDPQNF AIVMCFFRQL 840 NTWVSMTF

Sequence ? help Back to Top

Protein Sequence Length: 848 aa Download sequence

MDTPERNQIG TPKAKFEDSP VFNYINSLSP IKPVKSVHIT QTFSSLSFAS LPSVFTSPHV  60
SAHKESRFLR RHNTSDPSKP ESSLESGNKV SANEDPAQLY INSEELREDC VPGVSTGEDS  120
VEPSSEHSKF VIELPRNLKY DCGSPDCRPT TSCGTEAHCE LEVADLSAPL VPYVQKTSEE  180
GSSNDEAHLQ IICQTLQRKE GTGCDWESLI SDAADLLIFD SPNGTEAFKG LMQNSLDPAT  240
RFCTSLAPQL TQNDVNDEQN VQVLDIVGSG GQLETEDPSS QYGEASQLER TEQMEDHLNN  300
CMVSSQSEKE DNKVETPMQF NCKPAVLNLQ RGLRRRCLDF EMAGARRKSL DNVSNSSSNM  360
LSQSDEKITT NDKQLVPMKP GGESSRCILP GIGLHLNALA KTSKDYKIIK CESLAYGRQL  420
SLPNSTADIH SPTGGQGPGH ESFSSASSER DMDGTENGVQ LAHDASQEPA FLANEEFNQN  480
SPKKKRRRFE HAGETESCKR CNCKKSKCLK LYCECFAAGV YCIEPCSCQE CFNKPIHEDT  540
VLATRKQIES RNPLAFAPKV IRSSDSVPEL GEESSKTPAS ARHKRGCNCK KSSCLKKYCE  600
CYQGGVGCSI SCRCEGCKNA FGRKDGSFIG TEAELDEEEA EACEKSVAEK HQQKIEIQKN  660
EEQRLDSALP TTPLRLSRQM VSLPFSSKNK PPRSSVFSIG GSCSGLYTSQ KLGKPNILRP  720
ESKFERHSQT VPEDEMPEIL QGDGSPSTGV KTASPNSKRV CPPNSDFGPS PGRRTGAAPA  780
HPPPMERLYD QGPPPFLTKT YDIADDPATN LIVSCSRYNN SFVVLDPQNF AIVMCFFRQL  840
NTWVSMTF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	483	488	KKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	1e-131	CPP family protein