PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g180970.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family M-type_MADS
Protein Properties Length: 286aa    MW: 31842.4 Da    PI: 4.6272
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g180970.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF37.14.1e-1234701450
                      HHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
            SRF-TF 14 skRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                      ++R  ++ K A+ELS+LCd+ v+v+ ++ + ++ +++
  Pd.00g180970.m01 34 ARRMSTLKKMASELSILCDVAVCVVAVGADSEIETWP 70
                      5677788888**************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MAPPQLKSKK PKKMKPQVLK IDANGGSVLK PAWARRMSTL KKMASELSIL CDVAVCVVAV  60
GADSEIETWP ENQQDAKSIL LKHKNLGKLG KKIEKGTDYS FLDTMLKGLN ESGAVMMRDG  120
GTKTRTTSTC SFMEFYENIM GTSVLPDPPD QQQSMLLVDQ VPHHQQEDYC TTNSDGFYLE  180
DLHIAAAAPT LSNIDDYVSW LLDDHNDIGL MEDYIQFGDS DLAPLLESQE QQMPLLQPAQ  240
MDTNNSAHLS WLLGGGDIAT SDYLLVGFRI IRIQEILIFS YIFSVY