PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g179550.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YB
Protein Properties Length: 161aa    MW: 17670 Da    PI: 9.4341
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g179550.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB422.3e-13897588
             NF-YB  5 drflPianvsrimkkvlPanak......iskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylk 88
                       ++lP a v r++k  l + +k      + k+a     e +  fi ++++ a+d c+++kr+ti++dd+l al ++ f ++++pl++ lk
  Pd.00g179550.m01  8 AEELPKAIVRRVVKDKLSQCSKgdgdltLHKEALLAFSESARIFIHYLSATANDICKEKKRQTISADDVLKALEEIEFSEFIKPLEASLK 97
                      5789************9987773344335677777889***********************************************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MAKVVAEAEE LPKAIVRRVV KDKLSQCSKG DGDLTLHKEA LLAFSESARI FIHYLSATAN  60
DICKEKKRQT ISADDVLKAL EEIEFSEFIK PLEASLKGKN PGKNAGKNAE KSGGKNAGGK  120
QKAGTSKAKE VKKKRKLEEP SSRKLKEKEE DNQDENGSDD E
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1132137KKKRKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27470.14e-41NF-YB family protein