PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g178910.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 389aa MW: 43564.5 Da PI: 6.1976

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g178910.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160.4	6.8e-50	17	145	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 + pGfrF+Ptdeel+++yLk+k+eg + + evi+evdi+++ePwdLp k+v ++++ew+fFs+r +ky++g++++rat+ gyWkatgk+++ Pd.00g178910.m01 17 MFPGFRFSPTDEELISYYLKNKLEGPEpGKSVEVIPEVDICNFEPWDLPaKSVIQSDNEWFFFSPRGRKYPNGSQSRRATEFGYWKATGKERN 109 579********************996444589***********667777899******************************* PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 v+s +++++g+k+tLvf+ grapkge+t+W+mhey + Pd.00g178910.m01 110 VKS-TSNVIGTKRTLVFHMGRAPKGERTEWIMHEYCM 145 .999***************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MGTVSKEAQL SIAASSMFPG FRFSPTDEEL ISYYLKNKLE GPEPGKSVEV IPEVDICNFE 60 PWDLPAKSVI QSDNEWFFFS PRGRKYPNGS QSRRATEFGY WKATGKERNV KSTSNVIGTK 120 RTLVFHMGRA PKGERTEWIM HEYCMNDKSQ DSVVVCRLRK NSDFHLNDTT NGGSSSRNPL 180 STVHNSENAV SEVGIDHDKP VECYSKKSTS SHDSHSTEQI DSASESNQKQ TTEVTQTEST 240 GHQKGSFDDD FYADILNDDI IKLDEASVSA SADTLPVLAN KSEAEQNSHQ PMQAICNSEA 300 IPFQGTANRR IHLRKRKERF PAESLEGPNS QESPKTSADR MDDQHVLLYV IIIILVLLAL 360 LLSKFCFTDI AGSVSFLVER FLSSQKHHK

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MGTVSKEAQL SIAASSMFPG FRFSPTDEEL ISYYLKNKLE GPEPGKSVEV IPEVDICNFE  60
PWDLPAKSVI QSDNEWFFFS PRGRKYPNGS QSRRATEFGY WKATGKERNV KSTSNVIGTK  120
RTLVFHMGRA PKGERTEWIM HEYCMNDKSQ DSVVVCRLRK NSDFHLNDTT NGGSSSRNPL  180
STVHNSENAV SEVGIDHDKP VECYSKKSTS SHDSHSTEQI DSASESNQKQ TTEVTQTEST  240
GHQKGSFDDD FYADILNDDI IKLDEASVSA SADTLPVLAN KSEAEQNSHQ PMQAICNSEA  300
IPFQGTANRR IHLRKRKERF PAESLEGPNS QESPKTSADR MDDQHVLLYV IIIILVLLAL  360
LLSKFCFTDI AGSVSFLVER FLSSQKHHK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27300.1	6e-91	NAC family protein