PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g173140.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HB-other

Protein Properties

Length: 495aa MW: 55271.5 Da PI: 5.0793

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g173140.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	18.2	4.1e-06	399	456	6	51
S--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC..........TS-HHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFek..nrypsaeereeLAkkl..........gLterqVkvWFqNr 51 ft++++ e+e+l + ++ +s+e ++LA++ ++t +qV+ WFqN+ Pd.00g173140.m01 399 VFTHSEIMEMENLIKHprQQSLSQEFFQDLATSFsctpiragkpDITWEQVQSWFQNK 456 69*********99555*************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MAASPQPVSE NLIDFRAPPP SPIASGRRSL VTNDEVLTEY LEHSLQVPDL ILPDKFFPKQ 60 NSLENPPTID LLALNLDEFD ASLCKVVESI ARNGCFQLVN HGISSELVSS VQAAATGIFQ 120 VPPEKRAEIT RLPEKPYGFE EVHGEEVGSE LSEEFVWCRD QGLKLTMERI APIGYSNFSE 180 KLETLMTDIE KVSGKILPSL LKNSQTKFVY GNDDMVQGKE LGTVCCLYKH SQNVLEDEWD 240 SSLRYDVIKM LIRGTDYSHA LCLHLCDGSS EFHVYSKKGW VSFTPDKNAL VVTTGDQIQA 300 WSGGQYKHVI GRPIFKGVTE TVHVQGLKEF VPTTILVCSA AKPSGLDYFQ LATGSKSRRH 360 RSSSEPGLLS KPPLGVDSTE MDMELFRTRK REPMNSLSVF THSEIMEMEN LIKHPRQQSL 420 SQEFFQDLAT SFSCTPIRAG KPDITWEQVQ SWFQNKQKEL QANSNSSPTA LELFVDLSDS 480 NVSSNATENS QKPKD

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MAASPQPVSE NLIDFRAPPP SPIASGRRSL VTNDEVLTEY LEHSLQVPDL ILPDKFFPKQ  60
NSLENPPTID LLALNLDEFD ASLCKVVESI ARNGCFQLVN HGISSELVSS VQAAATGIFQ  120
VPPEKRAEIT RLPEKPYGFE EVHGEEVGSE LSEEFVWCRD QGLKLTMERI APIGYSNFSE  180
KLETLMTDIE KVSGKILPSL LKNSQTKFVY GNDDMVQGKE LGTVCCLYKH SQNVLEDEWD  240
SSLRYDVIKM LIRGTDYSHA LCLHLCDGSS EFHVYSKKGW VSFTPDKNAL VVTTGDQIQA  300
WSGGQYKHVI GRPIFKGVTE TVHVQGLKEF VPTTILVCSA AKPSGLDYFQ LATGSKSRRH  360
RSSSEPGLLS KPPLGVDSTE MDMELFRTRK REPMNSLSVF THSEIMEMEN LIKHPRQQSL  420
SQEFFQDLAT SFSCTPIRAG KPDITWEQVQ SWFQNKQKEL QANSNSSPTA LELFVDLSDS  480
NVSSNATENS QKPKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18380.1	6e-07	HB-other family protein