PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g165770.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 120aa MW: 13738 Da PI: 10.6216 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 31.8 | 2.4e-10 | 17 | 90 | 14 | 83 |
T-EE--HHH.HTT.---..--SEEEEEE.TTS-EEEEEE..EEETTE....EEE-TTHHHHHHHHT--TT-EEEEE CS B3 14 grlvlpkkfaeeh.ggkkeesktltled.esgrsWevkliyrkksgr....yvltkGWkeFvkangLkegDfvvFk 83 grlv+p++ ++ ++ + + + + d +++r++ ++l +++gr ++ ++GWk+Fvk++g+ +gD v F Pd.00g165770.m01 17 GRLVVPRDMLAMLpPVSPGNAISINVLDrPTNRVYVFQL--AGRRGRylkpVIQSRGWKRFVKDKGIAVGDEVWFW 90 689******98889555667788999998999*******..88888844544555****************99997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 120 aa Download sequence |
MELAHGVKKV ITATDVGRLV VPRDMLAMLP PVSPGNAISI NVLDRPTNRV YVFQLAGRRG 60 RYLKPVIQSR GWKRFVKDKG IAVGDEVWFW EEENPTYQTQ YRIAVFKPNL FPRHPDLHGV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25560.1 | 3e-07 | RAV family protein |