PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g149900.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 361aa    MW: 39638.1 Da    PI: 6.2758
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g149900.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH51.32.1e-16168214455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        hn+ E+rRR+riN+++  L+ l+P++      K +Ka++L +A+eY+k+Lq
  Pd.00g149900.m01 168 VHNMSEKRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 214
                       6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MADLYGTAPD SEEISNILSQ LLHGHGSSAS SSSSCMPFKP TYTHLLHSSV APHHVMTSSE  60
VLISETRHEH YHRFARSEDR RGVDGNSAAA VVESSSGFDF TDSGGYFQAE VKEGMESDAN  120
TSLKGRRISS ENDLGDFSYD SEGHDRSEVP LNTAPPRSLS KRSRAAEVHN MSEKRRRSRI  180
NEKMKALQNL IPNSNKTDKA SMLDEAIEYL KQLQLQVQML TMKNGLSLHP MCLPGVMQPM  240
QLPHMGLGLE EGSNKFPKSS RGISPFYENE DNPMQSAFNI SPGCAISNQP MVLPSVANVP  300
TSEATFGFEP SIQALYRPFS VPSSSKELFR DGEPQAKLDT SETGKNSSSH VDILSTKRPD  360
V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.18e-45bHLH family protein