PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g143290.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 270aa    MW: 30145.3 Da    PI: 6.301
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g143290.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B330.66.1e-101682361789
                       E--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
                B3  17 vlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                        +p +f +++ +++k   +t +l   + +sW v l +  + +++ ++ GW  F+ +n L++gD+++F l+++++
  Pd.00g143290.m01 168 HVPVSFSKHFiKLEK---QTAKLLV-RKKSWCVSL-IAHSVNTFPFSVGWAAFAWENCLRAGDVCIFGLVDKND 236
                       678888754454443...3555554.67*******.466777799***********************986544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MSASLRQKID HEWPAFSATT PLFLKMILDD TSRDTKLGGS LVFKYDGNSK FQVCILDASG  60
TEIDHPLALP VMEETNEDDE NNSVEILEDY DDENDNSAEI FGDYQPCPKT RQKSGPLSCP  120
LPRKKTRLST HSSPEISSSS SKRVVEAANK FISNHSFRVT VGSSLMPHVP VSFSKHFIKL  180
EKQTAKLLVR KKSWCVSLIA HSVNTFPFSV GWAAFAWENC LRAGDVCIFG LVDKNDISFH  240
WKFTCSDADY WGVVCCSDVF VLLVKFAGLC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.13e-07B3 family protein