PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g142000.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | TALE | ||||||||
Protein Properties | Length: 444aa MW: 49546.8 Da PI: 6.2975 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 23.4 | 1.1e-07 | 382 | 415 | 21 | 54 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + Pd.00g142000.m01 382 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 415 469*****************************87 PP | |||||||
2 | ELK | 28.7 | 2.9e-10 | 336 | 357 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ Pd.00g142000.m01 336 ELKHELKQGYKEKIVDIREEIL 357 9*******************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 444 aa Download sequence |
MAYHNHLSQQ DLPLHHFTDQ TQQQHQPFQS DQPDPNSKPT EPHHPFQAAP NWLNTALRNF 60 TNADANNNHN NSPNNNGGGG ASNFLNLHVT ASDSTTSQAS NQWLSQPHRP ILHRNHSDVI 120 DDVTAVAGDS MIAATISHDS ADLKPDSSLN KTDIVVESGG GDGGMINWQN ARHKAEILSH 180 PLYEPLLSAH VACLRIATPV DQLPRIDAQL AQSQNVVAKY SALGHGMVGD DKELDQFMRH 240 YVLLLCSFKE QLQQHVRVHA MEAVMACWEI EQSLQSLTGV SPGEGTGATM SDDEDDQVDS 300 DANLFDGSMD GHDSMGFGPL IPTESERSLM ERVRQELKHE LKQGYKEKIV DIREEILRKR 360 RAGKLPGDTT SVLKAWWQSH SKWPYPTEED KARLVQETGL QLKQINNWFI NQRKRNWHSN 420 PSTSTVLKSK RKSNAGENSG DRFG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G25220.1 | 0.0 | TALE family protein |