PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g141200.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HB-other
Protein Properties Length: 280aa    MW: 31742.4 Da    PI: 7.5139
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g141200.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.45.9e-09214261653
                       S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
          Homeobox   6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                       +++k  +e+Le++++k++ p+ +++  + + ++L+ ++V  WF  +R 
  Pd.00g141200.m01 214 RLKKAHVETLESVYRKTKRPTNAMISSIVHVTNLPRKRVVKWFEDKRS 261
                       5778899*************************************9996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MLPSSRNERP PTNLILPRQF PARFSSTLAL ARGRNQRTEV ASSKPKINKK ILAKKEVKDE  60
EEDVDEDAID ALFRLLEEDL KNDDASLDDE DLTEEELAKL EQELKTWQLR RLAAALKVGR  120
RKTSIKILAA ELCLDRPVVL ELLRNPPPSL LMMCAALPDE PAPTISVSQT MPVETDVETT  180
VETVVETTTE SSEVETTVNK PIHVMQQKFS AQKRLKKAHV ETLESVYRKT KRPTNAMISS  240
IVHVTNLPRK RVVKWFEDKR SEDGVTDSRL PYRRPAPNTA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.19e-63HB-other family protein