PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g137670.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ARR-B

Protein Properties

Length: 605aa MW: 65646 Da PI: 6.5096

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g137670.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	77.3	2e-24	151	196	9	55
G2-like 9 eLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl Pd.00g137670.m01 151 ELHQQFVGAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 196 9**********.******************************8 PP
2	Myb_DNA-binding	31.1	5.4e-10	151	195	7	48
HHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 7 eEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 e+++++v av+qlG + +k+I + m+ g+t++++ s++qky+ Pd.00g137670.m01 151 ELHQQFVGAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 195 9*******************************************7 PP
3	Response_reg	75.5	2e-25	35	143	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 vl+vdD+p+ +++l+++l+ y ev+ + +e al+ll+e++ +D+++ D+ mp+mdG++ll++ e +lp+i+++a + ++ + + + Pd.00g137670.m01 35 VLVVDDDPTCLMILEKMLRTCLY-EVTKCNRAEIALNLLRENKngYDIVISDVHMPDMDGFKLLERVGLEM-DLPVIMMSADDGKSVVMKGVT 125 89*******************.***********999999******************6644.8**************** PP TTESEEEESS--HHHHHH CS Response_reg 92 aGakdflsKpfdpeelvk 109 Ga d+l Kp+ +e+l + Pd.00g137670.m01 126 HGACDYLIKPVRIEALKN 143 ************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 605 aa Download sequence
MNLSNGMGSM STASSSGAWK SADVVSDQFP AGLRVLVVDD DPTCLMILEK MLRTCLYEVT 60 KCNRAEIALN LLRENKNGYD IVISDVHMPD MDGFKLLERV GLEMDLPVIM MSADDGKSVV 120 MKGVTHGACD YLIKPVRIEA LKNIWQHVVL ELHQQFVGAV NQLGIDKAVP KKILELMNVP 180 GLTRENVASH LQKYRLYLRR LSGVSQHPSN LNNSFLSPQE ASFGAMSSLN GLDLQTLAVT 240 GQLPAQSLAT LQAGLGRSTA KSGMPMPLVD QRNLFSFENP KLRFAEGQQH LSSSKPMNLL 300 HGIPTNMEAK QLANLHQSAQ SLGGVNMQVN AHGVQNSALL MQMSQPQSRG QILNETSGTH 360 VPRLSSSIGQ PILSNGIPSG VLGRNGIADN GRGAGYNPVQ QNSSMLNFPL NNSSELPGNN 420 FTLGSTPGLS SLTSKGAFPE DVNCEIKRSS GFAQSYDIFN ELHQHKSNDW DLQNVGLTFD 480 ASQHTNTMHG SLDSSVLVHQ GFSSSQRSAQ SRNPSTVGKA MFSIGEGTHH VNVQNNGQHL 540 NSLIVDNTVR VKAERVPDAS SQTSYFHEQF GQEDLMSALL KQQEGIGAAE NEFDFDGYSL 600 DNIPV

Sequence ? help Back to Top

Protein Sequence Length: 605 aa Download sequence

MNLSNGMGSM STASSSGAWK SADVVSDQFP AGLRVLVVDD DPTCLMILEK MLRTCLYEVT  60
KCNRAEIALN LLRENKNGYD IVISDVHMPD MDGFKLLERV GLEMDLPVIM MSADDGKSVV  120
MKGVTHGACD YLIKPVRIEA LKNIWQHVVL ELHQQFVGAV NQLGIDKAVP KKILELMNVP  180
GLTRENVASH LQKYRLYLRR LSGVSQHPSN LNNSFLSPQE ASFGAMSSLN GLDLQTLAVT  240
GQLPAQSLAT LQAGLGRSTA KSGMPMPLVD QRNLFSFENP KLRFAEGQQH LSSSKPMNLL  300
HGIPTNMEAK QLANLHQSAQ SLGGVNMQVN AHGVQNSALL MQMSQPQSRG QILNETSGTH  360
VPRLSSSIGQ PILSNGIPSG VLGRNGIADN GRGAGYNPVQ QNSSMLNFPL NNSSELPGNN  420
FTLGSTPGLS SLTSKGAFPE DVNCEIKRSS GFAQSYDIFN ELHQHKSNDW DLQNVGLTFD  480
ASQHTNTMHG SLDSSVLVHQ GFSSSQRSAQ SRNPSTVGKA MFSIGEGTHH VNVQNNGQHL  540
NSLIVDNTVR VKAERVPDAS SQTSYFHEQF GQEDLMSALL KQQEGIGAAE NEFDFDGYSL  600
DNIPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.2	1e-101	ARR-B family protein