PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1306090.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HB-other | ||||||||
Protein Properties | Length: 243aa MW: 26336.7 Da PI: 4.9101 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 23.8 | 7.5e-08 | 194 | 235 | 2 | 43 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterq 43 rk+ +++keq Lee F+++++++ +++ LAk+l+L rq Pd.00g1306090.m01 194 RKKLRLSKEQSAFLEESFKEHHTLNPKQKLALAKQLNLRPRQ 235 778899********************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MELCLSLGDV QAPAEPFGLV SSSSEKPRDD RVIMAASKTT GFCMSLSIGP SCDSSTSTSP 60 READQQLDRN DHQNDDDRSR FSAACGSKSD VPVQLDLLPH TPVALRSSSH GFPWPTPSDQ 120 NENVNRVEEV AAVSSSPTNS GASSFQMDIG LYSSNYRGSG GKRSHSPEAE GDEGERQSNS 180 RASDEDDING INTRKKLRLS KEQSAFLEES FKEHHTLNPK QKLALAKQLN LRPRQDEAEA 240 NGG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 193 | 199 | TRKKLRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06710.1 | 6e-19 | HD-ZIP family protein |