PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1301170.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CAMTA

Protein Properties

Length: 1086aa MW: 121404 Da PI: 5.8975

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1301170.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	185.3	6.4e-58	21	136	4	118
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptf 94 e ++rwl++ ei++iL nf+k+++++e+++rp+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+v+vl+cyYah+een++f Pd.00g1301170.m01 21 EaQHRWLRPAEICEILSNFQKFHISSEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENF 112 449*************************************************************************************** PP CG-1 95 qrrcywlLeeelekivlvhylevk 118 qrr+yw+Le++l +iv+vhylevk Pd.00g1301170.m01 113 QRRSYWMLEQDLMHIVFVHYLEVK 136 *******************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1086 aa Download sequence
MAERGSYSQG PRLDFQQLLG EAQHRWLRPA EICEILSNFQ KFHISSEPPN RPPSGSLFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSVDVLH CYYAHGEENE NFQRRSYWML 120 EQDLMHIVFV HYLEVKGNRA NAGGIREIDE VTPDLQKGSS WTSSPSNSNC RTPSGNTDYT 180 SPSSNLTSCE DADSGDSRQA SSFQSSFDSQ QMGNGPLTDK ADINLSLHPH LNNHDGPSSF 240 HGGNYRPYFE KDQQCYSDDS TCGIDSQKTL GVGSWEEILG QCTTGLHTVT SHGSKSSIQI 300 ALAGIPPEQQ NITSTEFLAG NSTLKEEFGI PLPFRTNWQI PLEENALQLP KWPLDQSMNL 360 QLPSNLDTRL FEQGTVDVNL RNVPELVTTH PNQRNDQLVQ NNFQAQLTNA ESQCLIIPSS 420 EPDIPKDGNI NYAFTLRQQL LDREEGLKKV DSFSRWVSKE LGEVDDLQMQ SSSGISWSTD 480 ECGNVADDSS LSPSISQDQL FSIVDFSPKW AYTDSEIEVL VIGTFLVSQK DVTKYNWSCM 540 FGEVEVPAQV LANGVLFCFA PPHSAGQVPF YVTCSNRLAC SEVREFEYQV GSTKDLDITN 600 ICNATTNDIH LHLRLESLLS LRSVSPSGQL VEGVKEKQNL ISKIISLKEE EEYLPLVEPT 660 AVNDLLQHEG MEHLIKLMKE KLYSWLLHKA IEDGKGPSVL DSEGQGVIHL AAALGYDWAI 720 KPIVTAGVSI NFRDVNGWTA LHWAAFYGRE QTVAILISLG AAPGALTDPS PEFPLGRAPA 780 DLASVNRHKG ISGFLAESSL TSYLDSLTMN DAKEGGAAEI SGIRAVKTFS ERIATPGSYS 840 DMPDALSLKD SLTAVTNATQ AADRIHQMFR MQSFDRRQLT EYDTDEFGMP DERAISLIAS 900 KSHKVGPVNG HTAAIQIQKK FRGWKKRKEF LIIRQRIVKI QAHVRGHQVR KQYKAITWSV 960 GILEKVILRW RRKGTGLRGF RPDAVAKAPN LQSVPSKDDD YDFLKKGRKQ TEERLQKALT 1020 RVKSMVQYPE GRAQYRRLLN VVEGFRETKV SDMATDGSEL KVEGGDDLID IDKLLDDDTF 1080 MSIAFD

Sequence ? help Back to Top

Protein Sequence Length: 1086 aa Download sequence

MAERGSYSQG PRLDFQQLLG EAQHRWLRPA EICEILSNFQ KFHISSEPPN RPPSGSLFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSVDVLH CYYAHGEENE NFQRRSYWML  120
EQDLMHIVFV HYLEVKGNRA NAGGIREIDE VTPDLQKGSS WTSSPSNSNC RTPSGNTDYT  180
SPSSNLTSCE DADSGDSRQA SSFQSSFDSQ QMGNGPLTDK ADINLSLHPH LNNHDGPSSF  240
HGGNYRPYFE KDQQCYSDDS TCGIDSQKTL GVGSWEEILG QCTTGLHTVT SHGSKSSIQI  300
ALAGIPPEQQ NITSTEFLAG NSTLKEEFGI PLPFRTNWQI PLEENALQLP KWPLDQSMNL  360
QLPSNLDTRL FEQGTVDVNL RNVPELVTTH PNQRNDQLVQ NNFQAQLTNA ESQCLIIPSS  420
EPDIPKDGNI NYAFTLRQQL LDREEGLKKV DSFSRWVSKE LGEVDDLQMQ SSSGISWSTD  480
ECGNVADDSS LSPSISQDQL FSIVDFSPKW AYTDSEIEVL VIGTFLVSQK DVTKYNWSCM  540
FGEVEVPAQV LANGVLFCFA PPHSAGQVPF YVTCSNRLAC SEVREFEYQV GSTKDLDITN  600
ICNATTNDIH LHLRLESLLS LRSVSPSGQL VEGVKEKQNL ISKIISLKEE EEYLPLVEPT  660
AVNDLLQHEG MEHLIKLMKE KLYSWLLHKA IEDGKGPSVL DSEGQGVIHL AAALGYDWAI  720
KPIVTAGVSI NFRDVNGWTA LHWAAFYGRE QTVAILISLG AAPGALTDPS PEFPLGRAPA  780
DLASVNRHKG ISGFLAESSL TSYLDSLTMN DAKEGGAAEI SGIRAVKTFS ERIATPGSYS  840
DMPDALSLKD SLTAVTNATQ AADRIHQMFR MQSFDRRQLT EYDTDEFGMP DERAISLIAS  900
KSHKVGPVNG HTAAIQIQKK FRGWKKRKEF LIIRQRIVKI QAHVRGHQVR KQYKAITWSV  960
GILEKVILRW RRKGTGLRGF RPDAVAKAPN LQSVPSKDDD YDFLKKGRKQ TEERLQKALT  1020
RVKSMVQYPE GRAQYRRLLN VVEGFRETKV SDMATDGSEL KVEGGDDLID IDKLLDDDTF  1080
MSIAFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein