PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1299700.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GeBP

Protein Properties

Length: 670aa MW: 74498.8 Da PI: 8.6734

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1299700.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	114.8	5.1e-36	169	263	1	98
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifels 92 klfqr+ws++Dei++L+G+id+ +k+g++p++d+ af++f+kks++++v+k+ql +Kirr+KkK++++v+k gk+ + k+h+qk f+ls Pd.00g1299700.m01 169 KLFQRIWSDDDEITILKGMIDYSTKKGADPYSDMGAFHDFIKKSLKADVNKTQLQDKIRRIKKKYETNVAK---GKKYNPVKPHEQKLFDLS 257 579******************************************************************...999999******** PP DUF573 93 kkiWgs 98 kk+Wgs Pd.00g1299700.m01 258 KKVWGS 263 **95 PP

Sequence ? help Back to Top
Protein Sequence Length: 670 aa Download sequence
MAPKRPSPLD EPPAASSSEE EVASSEEEVD GEEEEESGSG SESESEEPEP PKAAPTPVAA 60 KKPDSATVNS KPQSSSSGSE SESESDSELG KDRVVKPIVS KPMEETPKTK KPRSKASAIT 120 TPAARAGLKR PSESDPKDSK RPKKKVTDPD QEREHAGEEK KSGGDDSKKL FQRIWSDDDE 180 ITILKGMIDY STKKGADPYS DMGAFHDFIK KSLKADVNKT QLQDKIRRIK KKYETNVAKG 240 KKYNPVKPHE QKLFDLSKKV WGSGEGSIGL SGLSEQSKSN GKARTNQKGN KTLASLKAEL 300 LSSPERPKEC EKVEFGLKPS GSESLSEVIG FDKGFRELGL PEGVVKQGLE LIGEAKRAEL 360 KEKWKKLHVA ELELFVKKSE LMRDQAKPGA FGAVTLPFSV REGINIFLSG FIPTENPRFR 420 DESLTFKVET PQESGEEIET YARYRYPSMT KTLREFKLQV IEGEFTNSQI IVMLGENGSG 480 KTTFMRMLVG LSKPDFGVEI PELHVSYKNQ KINPRRATKV KDLLHEKICD SCTDPQFVTD 540 VMKPLQIEQL MDQQITKLCG GELQRVALCV CLGKPADIYL MMNQVHILIL SSTKLLSMKE 600 SHQLIVLQIL RSLLTGMNLF LSQLDITFRR WDSTKPQPPN GKVVQSFRGQ GIDRYTLVNI 660 TNNPRSFATF

Sequence ? help Back to Top

Protein Sequence Length: 670 aa Download sequence

MAPKRPSPLD EPPAASSSEE EVASSEEEVD GEEEEESGSG SESESEEPEP PKAAPTPVAA  60
KKPDSATVNS KPQSSSSGSE SESESDSELG KDRVVKPIVS KPMEETPKTK KPRSKASAIT  120
TPAARAGLKR PSESDPKDSK RPKKKVTDPD QEREHAGEEK KSGGDDSKKL FQRIWSDDDE  180
ITILKGMIDY STKKGADPYS DMGAFHDFIK KSLKADVNKT QLQDKIRRIK KKYETNVAKG  240
KKYNPVKPHE QKLFDLSKKV WGSGEGSIGL SGLSEQSKSN GKARTNQKGN KTLASLKAEL  300
LSSPERPKEC EKVEFGLKPS GSESLSEVIG FDKGFRELGL PEGVVKQGLE LIGEAKRAEL  360
KEKWKKLHVA ELELFVKKSE LMRDQAKPGA FGAVTLPFSV REGINIFLSG FIPTENPRFR  420
DESLTFKVET PQESGEEIET YARYRYPSMT KTLREFKLQV IEGEFTNSQI IVMLGENGSG  480
KTTFMRMLVG LSKPDFGVEI PELHVSYKNQ KINPRRATKV KDLLHEKICD SCTDPQFVTD  540
VMKPLQIEQL MDQQITKLCG GELQRVALCV CLGKPADIYL MMNQVHILIL SSTKLLSMKE  600
SHQLIVLQIL RSLLTGMNLF LSQLDITFRR WDSTKPQPPN GKVVQSFRGQ GIDRYTLVNI  660
TNNPRSFATF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61730.1	2e-26	GeBP family protein