PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1299140.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GRF

Protein Properties

Length: 264aa MW: 29669.8 Da PI: 7.5924

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1299140.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	43.5	5.5e-14	78	103	1	26
WRC 1 daepgrCrRtDGKkWRCsrrvlegkk 26 d+epgrCrRtDGKkWRCs+++++++k Pd.00g1299140.m01 78 DPEPGRCRRTDGKKWRCSKEAYPDSK 103 79*********************987 PP
2	QLQ	56.1	1.1e-19	14	47	2	35
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 +FT++Q+q+L++Q+l++Ky+a++ P+P +L+ + Pd.00g1299140.m01 14 PFTPNQWQELEHQALIFKYMASGIPIPTDLVYSL 47 9*****************************9766 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MLSGNPSTAR NRYPFTPNQW QELEHQALIF KYMASGIPIP TDLVYSLKRR LDNSISSRLF 60 PHPMGWGCYE MGFGRKVDPE PGRCRRTDGK KWRCSKEAYP DSKPPPGSVF SPQNNSSSAT 120 PHLFLNSGSY NTQAEKDYRY LHGTKGSVDE LAFFPESSAN GRSILTGGSS SCQPLMSSYR 180 GYSQPQFQSL TDHHNPEVSQ QSQEEEQHCF VWGTDFKSSK AIKTEKEAAE TQKSLHHFFG 240 DWQPPKSTDT WLDLSSNSGV PNDG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	6e-50	GRF family protein