PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1298940.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 549aa    MW: 61171.3 Da    PI: 6.038
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1298940.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS258.91.8e-791575412374
               GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                        ++lL  cA a++ g+l+++q+lL  l+elas +gd+++Rlaa+ ++AL ++l++s ++ +++ pp + ++++     ++l  f+evsP++ f
  Pd.00g1298940.m01 157 EQLLNPCALAITGGNLTRVQHLLYVLHELASLTGDANHRLAAHGLRALTQHLSSSAPNGSASAPPVTFASTEPRFFQKSLLKFYEVSPWFAF 248
                        689*****************************************************************98888888888888********** PP

               GRAS  94 shltaNqaIleavege....ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesg..............skeeleetgerLa 166
                         + +aN+ Il+ +++e    + +Hi+D ++s+G+QWp+Ll+aL+ Rp ++pp ++iT+v++++++                    +   rL 
  Pd.00g1298940.m01 249 PNNIANSSILQLIAEEsdrtRNLHIVDVGVSHGMQWPTLLEALTRRPgGPPPLVKITVVSAAANTennqnrenretpfsIGPPGDNFSFRLL 340
                        ***********999998777889************************55566********98888888766655544444444566778*** PP

               GRAS 167 kfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh...nsesFle 255
                         fA+ +++++++n l  + l++l+ + ++++++E l+V+++++lh+l    +++++er+e+Lk++++++Pk v+++e+++++   n ++F++
  Pd.00g1298940.m01 341 GFAKFMNINLQINRLDNQPLQNLNAQLIDTSNDELLIVCVQFRLHNLN---HNTPDERTEFLKALRNMEPKGVILSENNMECscnNCGDFAT 429
                        **************9999*****************************8...77777889*******************9665446778**** PP

               GRAS 256 rflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.s 346
                        +f++ +ey + ++ds+++ +    + r + Er++++ e+ ++++++g++    +e +ekW er++ +GF    ++e+a +  ++llrk++ +
  Pd.00g1298940.m01 430 GFSRQVEYLWRFLDSTSSAF----KGRESDERRVMEGEAAKALTNRGEM----NEGKEKWCERMKGVGFVGQVFGEDAIDGGRALLRKYDsN 513
                        ****************6665....5555556666666699999999998....9************************************99 PP

               GRAS 347 dgyrveeesgslvlgWkdrpLvsvSaWr 374
                        +++rv+e++g++ l Wk++p+ ++S W+
  Pd.00g1298940.m01 514 WEMRVDEKDGCAGLWWKGQPVSFCSLWK 541
                        99*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 549 aa     Download sequence    
MTTQEPEPNS TSDHILDWLE DSVTFFPTFL DDPYHSNDIN GLQWWDESHD LIHSNTTSTS  60
LNNLTGIALP TTTRPPDPTN LNQQSPSDSS KKRKVSDDQL IDQKNHVRPI SQAGQGDQLV  120
EEVVVPVKRT NGNKKGAAKT TGNNCNNGNS KEGRWAEQLL NPCALAITGG NLTRVQHLLY  180
VLHELASLTG DANHRLAAHG LRALTQHLSS SAPNGSASAP PVTFASTEPR FFQKSLLKFY  240
EVSPWFAFPN NIANSSILQL IAEESDRTRN LHIVDVGVSH GMQWPTLLEA LTRRPGGPPP  300
LVKITVVSAA ANTENNQNRE NRETPFSIGP PGDNFSFRLL GFAKFMNINL QINRLDNQPL  360
QNLNAQLIDT SNDELLIVCV QFRLHNLNHN TPDERTEFLK ALRNMEPKGV ILSENNMECS  420
CNNCGDFATG FSRQVEYLWR FLDSTSSAFK GRESDERRVM EGEAAKALTN RGEMNEGKEK  480
WCERMKGVGF VGQVFGEDAI DGGRALLRKY DSNWEMRVDE KDGCAGLWWK GQPVSFCSLW  540
KTDVKVSNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13840.11e-166GRAS family protein