PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1297720.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 433aa MW: 47320.4 Da PI: 5.2205

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1297720.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.3	3.6e-33	214	268	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +pr+rWtpeLHerFveav++L G+ekAtPk +l++m+v+gLt++hvkSHLQkYRl Pd.00g1297720.m01 214 RPRMRWTPELHERFVEAVNKLDGAEKATPKGVLKVMNVEGLTIYHVKSHLQKYRL 268 59****************************************************8 PP
2	Myb_DNA-binding	53.9	4.1e-17	216	267	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e++v+av++l g t+k + + m+ +g+t +++ks++qky+ Pd.00g1297720.m01 216 RMRWTPELHERFVEAVNKLDGAekaTPKGVLKVMNvEGLTIYHVKSHLQKYR 267 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MHDFLGSESE GRSLAGSECS SARLSPFIRA ESLGSPTNIR GSSVQHSQNT FSRSSVFCTS 60 LYQSSSSSSE TSRQLGNLPF LPHPPTYSQS ISAVDSKSPF LLSDDMSNQY DDEQSEDLMK 120 DFLNLHGDGS HGISCGSDTL ALTEQLELQF LSDQLDMAIT DNGENPGLDE IYEIPQASPK 180 PSIGLTCSKS CHLTTPPVDA LSSHPSPGPS PAHRPRMRWT PELHERFVEA VNKLDGAEKA 240 TPKGVLKVMN VEGLTIYHVK SHLQKYRLAK YMPEKREDKK ASSSEEKKAA SSSSESDGRR 300 KGSIQITEAL RMQMEVQKQL HEQLEVQRAL QLRIEDHAKY LQKILEEQQK AGSALLSPQA 360 LSSLATNSIQ EPEQQPSSSA GVSPTQPAES DSSSPLSLKH KATDSSESEP PACTKKQCLE 420 EKPDEGVVEN PQQ

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MHDFLGSESE GRSLAGSECS SARLSPFIRA ESLGSPTNIR GSSVQHSQNT FSRSSVFCTS  60
LYQSSSSSSE TSRQLGNLPF LPHPPTYSQS ISAVDSKSPF LLSDDMSNQY DDEQSEDLMK  120
DFLNLHGDGS HGISCGSDTL ALTEQLELQF LSDQLDMAIT DNGENPGLDE IYEIPQASPK  180
PSIGLTCSKS CHLTTPPVDA LSSHPSPGPS PAHRPRMRWT PELHERFVEA VNKLDGAEKA  240
TPKGVLKVMN VEGLTIYHVK SHLQKYRLAK YMPEKREDKK ASSSEEKKAA SSSSESDGRR  300
KGSIQITEAL RMQMEVQKQL HEQLEVQRAL QLRIEDHAKY LQKILEEQQK AGSALLSPQA  360
LSSLATNSIQ EPEQQPSSSA GVSPTQPAES DSSSPLSLKH KATDSSESEP PACTKKQCLE  420
EKPDEGVVEN PQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13040.1	1e-105	G2-like family protein