PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1296960.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 256aa MW: 29345.6 Da PI: 9.2166 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 40.9 | 3.7e-13 | 11 | 68 | 35 | 96 |
EEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 35 tltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 + tl+d+sg W+v l + +++r+++ +GW+ Fvk++ L+ +vF +dg+s+f v++ Pd.00g1296960.m01 11 KCTLRDPSGGCWTVGL--EVRGDRFFFHEGWQPFVKDHSLEIANALVFDYDGKSKF--DVTL 68 579*************..*********************************99988..5555 PP | |||||||
2 | B3 | 58.5 | 1.2e-18 | 149 | 243 | 6 | 99 |
..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 ++++ ++ r+ +pk+ a + g++ +k +++ed++g sW+vkl+ + ++gr ++tkGW+e ++an++ gD++vF+l++ + + +++ Pd.00g1296960.m01 149 IRAMRKNRYRMNFPKELAVAKGLIR--KKSVRVEDPNGISWDVKLRLdekEHNGGRLLMTKGWSECCQANNISLGDTMVFELVNVMHGGMKM 238 5566778899************995..557***************99877777778***************************999999*** PP EEE-S CS B3 95 kvfrk 99 ++fr Pd.00g1296960.m01 239 HIFRG 243 **996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MDHVNGRLPP KCTLRDPSGG CWTVGLEVRG DRFFFHEGWQ PFVKDHSLEI ANALVFDYDG 60 KSKFDVTLYD PIGSEKELEP AKKRRGNRAR VEEEIIELDT EEDSEEDARM SNIRKRKSFK 120 SGKRIARTDS GKETSNAPIV FISKHLCFIR AMRKNRYRMN FPKELAVAKG LIRKKSVRVE 180 DPNGISWDVK LRLDEKEHNG GRLLMTKGWS ECCQANNISL GDTMVFELVN VMHGGMKMHI 240 FRGNSYVVLD ASCVKY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34400.1 | 3e-12 | B3 family protein |