PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1296070.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 360aa MW: 40511.9 Da PI: 6.997

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1296070.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.4	5.9e-32	77	130	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 rlrWtp+LH +Fv+ave+LGG+e+AtPk +l+lm+vkgL+++hvkSHLQ+YR+ Pd.00g1296070.m01 77 SRLRWTPDLHLCFVHAVERLGGQERATPKLVLQLMNVKGLSIAHVKSHLQMYRS 130 69***************************************************7 PP
2	Myb_DNA-binding	51.4	2.5e-16	78	129	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +v+av++lGg t+k++ + m+ kg++ ++ks++q+y+ Pd.00g1296070.m01 78 RLRWTPDLHLCFVHAVERLGGQeraTPKLVLQLMNvKGLSIAHVKSHLQMYR 129 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MKSKSSTEEV PETSPSISKE EFEDEDDEGD EGEEEKVDKD GLQLRNNGVS SSNSTIEENE 60 KKGVSGSVRQ YVRSKTSRLR WTPDLHLCFV HAVERLGGQE RATPKLVLQL MNVKGLSIAH 120 VKSHLQMYRS KKMEDPDQVM SEKGFFMEGG DNHIYNLTQL SMLQSFNQWP SSGLRYGTAT 180 DVSWRGRQHQ MYSPYNTHRT ALLDHNTRNI GLYGSVADRI FGNNNNNNPT SANNHLHTNN 240 PSPSYVQTTW RRHQIRDESF QSTIHVPCQD HSWRAIREGQ NMLKRKAPDS DHTTCDLDLT 300 LSLKVPPKDD HEFGKGLEGC SLSLSLSSSS SSKLSMKKLE GGGHGRGEHG RMPSTLDLTL

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MKSKSSTEEV PETSPSISKE EFEDEDDEGD EGEEEKVDKD GLQLRNNGVS SSNSTIEENE  60
KKGVSGSVRQ YVRSKTSRLR WTPDLHLCFV HAVERLGGQE RATPKLVLQL MNVKGLSIAH  120
VKSHLQMYRS KKMEDPDQVM SEKGFFMEGG DNHIYNLTQL SMLQSFNQWP SSGLRYGTAT  180
DVSWRGRQHQ MYSPYNTHRT ALLDHNTRNI GLYGSVADRI FGNNNNNNPT SANNHLHTNN  240
PSPSYVQTTW RRHQIRDESF QSTIHVPCQD HSWRAIREGQ NMLKRKAPDS DHTTCDLDLT  300
LSLKVPPKDD HEFGKGLEGC SLSLSLSSSS SSKLSMKKLE GGGHGRGEHG RMPSTLDLTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40260.1	1e-49	G2-like family protein