PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1295170.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ZF-HD

Protein Properties

Length: 541aa MW: 58571.8 Da PI: 8.6589

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1295170.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	103.6	1.2e-32	84	139	4	60
ZF-HD_dimer 4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 +rY+eClkNhAa++Gg+++DGCgEfmps geegt +alkCaAC+CHRnFHR+ev+ e Pd.00g1295170.m01 84 IRYRECLKNHAANIGGNVFDGCGEFMPS-GEEGTLEALKCAACDCHRNFHRKEVDGE 139 79***********************9.999*******************9865 PP

Sequence ? help Back to Top
Protein Sequence Length: 541 aa Download sequence
MFKASVMDFR AQPQDNEMRT VGIHNGNNTY ATSLHQTLDH HIQHPHPPLQ PLIRDPDPDR 60 ALVGTPVPPT VLASGGPKST SKIIRYRECL KNHAANIGGN VFDGCGEFMP SGEEGTLEAL 120 KCAACDCHRN FHRKEVDGET TAFSPGSRRS SIMLSPLQLP PPLPSPSSAL HHHHHHHQKF 180 SMAPIIQPMN VAFGSGGGGT ESSSEDLNVF QSNNAEGGLP MPPFAMSKKR FRTKFTPEQK 240 DRLMEFAEKV GWRIQKQDEE EVERFCSEVG VKRQECPVLV FPCHGIVLPE ACRSIFVSLF 300 MAASVNNIAA TFATVPKTSS PSSSSSSSNP HQTKFSLSLS HKSISTSWNL HKTLPRSQRS 360 SLLNLYGPPG PPPNGSISTV HPPALMITPK PSKPFSVCTG DKLPNITLSY LDPNDGAKLI 420 SLSTLCKGKR VVLVGVSAPF SPRCTRFVKR VESARGKSSD LIACVAASDV FVMRAWGENL 480 AVGDRVMMLS DGRGELGNAL GVSLNLNTTT NACLVTFNGV IKSVEFDKEE GSLVGTKSMA 540 H

Sequence ? help Back to Top

Protein Sequence Length: 541 aa Download sequence

MFKASVMDFR AQPQDNEMRT VGIHNGNNTY ATSLHQTLDH HIQHPHPPLQ PLIRDPDPDR  60
ALVGTPVPPT VLASGGPKST SKIIRYRECL KNHAANIGGN VFDGCGEFMP SGEEGTLEAL  120
KCAACDCHRN FHRKEVDGET TAFSPGSRRS SIMLSPLQLP PPLPSPSSAL HHHHHHHQKF  180
SMAPIIQPMN VAFGSGGGGT ESSSEDLNVF QSNNAEGGLP MPPFAMSKKR FRTKFTPEQK  240
DRLMEFAEKV GWRIQKQDEE EVERFCSEVG VKRQECPVLV FPCHGIVLPE ACRSIFVSLF  300
MAASVNNIAA TFATVPKTSS PSSSSSSSNP HQTKFSLSLS HKSISTSWNL HKTLPRSQRS  360
SLLNLYGPPG PPPNGSISTV HPPALMITPK PSKPFSVCTG DKLPNITLSY LDPNDGAKLI  420
SLSTLCKGKR VVLVGVSAPF SPRCTRFVKR VESARGKSSD LIACVAASDV FVMRAWGENL  480
AVGDRVMMLS DGRGELGNAL GVSLNLNTTT NACLVTFNGV IKSVEFDKEE GSLVGTKSMA  540
H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75240.1	8e-54	ZF-HD family protein