PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1294590.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | Trihelix | ||||||||
Protein Properties | Length: 298aa MW: 33941.6 Da PI: 10.4871 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 49.7 | 9.8e-16 | 29 | 121 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 +W+++ + +Liea e++ +l+rg+l++++Weev++++ +r+ +qCk++ + l+k+yk +k++ ++ + + +s +p+f+ l Pd.00g1294590.m01 29 CWSEDATFTLIEAWGERHLSLNRGNLRQKHWEEVADAVnashvtaDNPRSRRTDVQCKNRVDTLKKKYKIEKARVSDSNGDYTSPWPFFSLL 120 7*************************************99999966666789************************99999999*****988 PP trihelix 86 e 86 + Pd.00g1294590.m01 121 D 121 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 298 aa Download sequence |
MDFVAGSPSP VTAPRPPSKT ASVPVREDCW SEDATFTLIE AWGERHLSLN RGNLRQKHWE 60 EVADAVNASH VTADNPRSRR TDVQCKNRVD TLKKKYKIEK ARVSDSNGDY TSPWPFFSLL 120 DSLIGSKFPK PSPPLPRRCS PSPPLPRRCS PSPPLPRRSP PSAPLQWTFP VARRSATVKR 180 PAPAFFPAPG DEPVEESEGS PSRSSVEGSR MRDRDREVGC VELAMAIERF AEIYERVEQR 240 KQRQMVELEK QRMQFAKDLE YHRMQLFMET TKHQLRKIKR AKRSSSSPGR QLLRGDEV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58630.1 | 2e-69 | Trihelix family protein |