PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1288990.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 296aa    MW: 32005.2 Da    PI: 5.825
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1288990.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA49.55.9e-16207243135
               GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                        C +Cg ++  Tp++Rrgp+g+++LCnaCGl+++ +g+
  Pd.00g1288990.m01 207 CKHCGISSksTPMMRRGPSGPRSLCNACGLFWANRGT 243
                        *****99999***********************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MYGHSEPMTM PNPIPAGGDD DAAGPGVDSI ENAHIHYEPH TLEDGGGVVA VVEDVSSDPV  60
YDVGSSEMRA QPYDGSSQLT LSFRGQVFVF DAVTPEKVQA VLLLLGGSEL SSGPQGAELA  120
SQNQRGTEDF PIRCSQPHRA ASLSRFRQKR KERCFDKKVR YSVRQEVALR MQRNKGQFSS  180
SKKSDGDYSW GNGQESGQDD SHAETSCKHC GISSKSTPMM RRGPSGPRSL CNACGLFWAN  240
RGTLRELSKR TQDHSVTPVE QGEADTKDLN SVTAIDAHNS LVPFSNGDSS ALVAEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.22e-86GATA family protein