PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1288570.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 370aa MW: 41349.1 Da PI: 10.2673

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1288570.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	33.1	9.9e-11	161	258	5	83
-..-HHHHT.T-EE--HHH.HTT---..--SEEEEEETTS................-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT CS B3 5 ltpsdvlks.grlvlpkkfaeehggkkeesktltledesg................rsWevkliyrkksgr..yvltkGWkeFvkangLkeg 77 l dv + +r+++p k ++e ++++ +++l+l++ ++ ++++++l+ + +g+ y l +GW+e +kan+Lk+g Pd.00g1288570.m01 161 LFDTDVADNnQRFSVPMKQVKEDFLSEKDQTELKLRNGHNqkhlvgipvkvldpslKEYNLRLKKWTMGGSivYNLVSGWREIAKANKLKTG 252 5555655553899********777777788888887778888888888888888***88888888789999************* PP -EEEEE CS B3 78 DfvvFk 83 D++ + Pd.00g1288570.m01 253 DTLQLW 258 *99765 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MLAEVATQQL MELGNGNGLT TKWVFDEEAV LAEFISFCAK KKRSEFKTFH FSDINIPKKK 60 RSNMRRTQRR FLPLASHDSV LSISCMNMKR KRLSAHSGSD HGHEDNNNEA LVQKKQKLVH 120 VKSTADVKSS SSLKREMPQD MKNRISSIGG GDLKLVIEKE LFDTDVADNN QRFSVPMKQV 180 KEDFLSEKDQ TELKLRNGHN QKHLVGIPVK VLDPSLKEYN LRLKKWTMGG SIVYNLVSGW 240 REIAKANKLK TGDTLQLWSF RDDSNKLGFA LVKVSTTTME VDQNGLGAST SSQNGTNGHT 300 LSTAEVNLLK TSDGTVHRWS IKCKSQFRFA LVKVSKTKVE VQQCRHGAST CSSGQNGQTG 360 SSISCISHDC

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MLAEVATQQL MELGNGNGLT TKWVFDEEAV LAEFISFCAK KKRSEFKTFH FSDINIPKKK  60
RSNMRRTQRR FLPLASHDSV LSISCMNMKR KRLSAHSGSD HGHEDNNNEA LVQKKQKLVH  120
VKSTADVKSS SSLKREMPQD MKNRISSIGG GDLKLVIEKE LFDTDVADNN QRFSVPMKQV  180
KEDFLSEKDQ TELKLRNGHN QKHLVGIPVK VLDPSLKEYN LRLKKWTMGG SIVYNLVSGW  240
REIAKANKLK TGDTLQLWSF RDDSNKLGFA LVKVSTTTME VDQNGLGAST SSQNGTNGHT  300
LSTAEVNLLK TSDGTVHRWS IKCKSQFRFA LVKVSKTKVE VQQCRHGAST CSSGQNGQTG  360
SSISCISHDC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	40	61	KKKRSEFKTFHFSDINIPKKKR
2	41	62	KKKRSEFKTFHFSDINIPKKKR
3	89	117	KRKRLSAHSGSDHGHEDNNNEALVQKKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G05930.1	3e-13	B3 family protein