PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1286770.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YA
Protein Properties Length: 341aa    MW: 37085.7 Da    PI: 9.8819
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1286770.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA96.43.1e-30154209258
          CBFB_NFYA   2 eplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                         p+YVNaKQy++I++RRq+Rak+  e++  ++ rkpy+heSRh hA+rRpRg+gGrF
  Pd.00g1286770.m01 154 GPIYVNAKQYHGIIRRRQSRAKAVMENRA-AALRKPYMHESRHLHAMRRPRGCGGRF 209
                        69***************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MAMQTVYFKE HEGITNPMGQ LSSALSGPWW SAFGSQPSYG ESCGQSKPFT MEHPSSGDQL  60
TATKLTGRGT EQGLDKGNTN QFTIFPGDGQ KSQAAISLQS SPQKYRARFE LGFSQPMICA  120
KYPYMDQCYG LFSTYGPQIS GRIMLPLNLT ADEGPIYVNA KQYHGIIRRR QSRAKAVMEN  180
RAAALRKPYM HESRHLHAMR RPRGCGGRFL NTKTMNNGKN GTEGTQVGDG QLFRHSGSHS  240
SELLQSESGT LNSSKETNGS SSNISGSEVT SVCSRRDLDC FSINHLSPSV HSLSGMMDSA  300
RAFGSRIARP HLVAIEGKSF LAHVRIGSPA IPCNHPARSG G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.24e-58NF-YA family protein