PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1283600.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 1005aa MW: 114131 Da PI: 8.8368 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 32.6 | 1.9e-10 | 390 | 434 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++WT+ Ed+ l+++v++ G ++W Ia +g++Rt+ qc r+q Pd.00g1283600.m01 390 KSWTAKEDKNLLHLVQEKGIDNWFNIAVLLGTNRTPFQCLARYQR 434 58*****************************************96 PP | |||||||
2 | Myb_DNA-binding | 41.7 | 2.7e-13 | 443 | 486 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 WT++Ed +l av+ lG g+W ++a+ + gRt+ qc +rw k Pd.00g1283600.m01 443 REWTKDEDARLRLAVEALGEGDWQSVASALE-GRTGSQCSNRWKK 486 68*****************************.***********98 PP | |||||||
3 | Myb_DNA-binding | 44.8 | 2.9e-14 | 496 | 539 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 grWT+eEd++l+ a ++G+++W++ a+ ++ gRt qc++r+ + Pd.00g1283600.m01 496 GRWTPEEDKRLKVAQMLFGPKNWNKTAQFVP-GRTQAQCRDRYVN 539 8******************************.***********77 PP | |||||||
4 | Myb_DNA-binding | 44.9 | 2.6e-14 | 548 | 591 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g WT+eEd +l +a++++G W+++a++++ +Rt+++c rw + Pd.00g1283600.m01 548 GEWTEEEDSRLREAIAEYGYC-WSKVAACVP-RRTDNMCWRRWKVL 591 68*****************99.*********.***********865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1005 aa Download sequence |
MEAIRRACML TGTNPDDLNP NNNNQGGGDL RHSSGSESES DSDEVDDDIE LLRKIRSRFS 60 NISDFCEPLS LKPLSSLPPA VSDDEEDDYQ TLLSVQKRFA AYQNDTCKPV KETCNEIAHE 120 SSHESSQGTE DACMAIHPLS DNAEGQPSAS IELQQSDSCR PSTLPAKYST FPKSAQVFMD 180 AIKKNRSSQK FLRSKLVQIE AKIEENRKLK ERVKILKDFQ VSCKKRTGEA LSQKKDPRVQ 240 LILVNRPRKF RDLKAHDKKI SAMFYAPEEN SHVANYRMTL TKFLHSLDRK KWSKAEKKAL 300 EKGIRQQFQE MVLQFSVHES SCSERPYGDS NHIDDILASI KDLEITPEKI REFLPKVNWE 360 QLASMYIVGR SGGECEARWL NWEDPLINHK SWTAKEDKNL LHLVQEKGID NWFNIAVLLG 420 TNRTPFQCLA RYQRSLNASI LKREWTKDED ARLRLAVEAL GEGDWQSVAS ALEGRTGSQC 480 SNRWKKSLHP TRKREGRWTP EEDKRLKVAQ MLFGPKNWNK TAQFVPGRTQ AQCRDRYVNS 540 LEPSLKWGEW TEEEDSRLRE AIAEYGYCWS KVAACVPRRT DNMCWRRWKV LFPDEVSLLK 600 EEKRIRKVAL MCNFVDRETE RPALGPNDFR PPIVTSTKTL TYSRKQKGKL SKVSKKIRSR 660 RQRNNSQSCS KVSEIDNFDK VETCEGHDAS NTKNKVRKQR RIRHKGTEPT GECQVVVTLP 720 CEQDTHKEPR EMSCSDQIVG TSDGDDTTLA CFLRNKSKKR KLGPVPSING KKKRKLVASD 780 SAVQECPANS IQKGCEVHPE MDEVCDGNQI VSFRKDDEFV VHCDDRISDR MPPCSVQSSH 840 LNGNIMASDN EPDGLKLVSG WKAGLQEPVR KVVGIDPESD GDTDDFVLAS LRKKKLKKRH 900 PQNAKSGPHA CPPSGVTTRS EPLPKRVDQS NDRSQVPFVA VGNEPGAVDI GKQHGVDHRE 960 TVKEIVNIGA EGDHEAGDTT LACFLRNKSN NRQRQSRRGD NQKPR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 753 | 761 | LRNKSKKRK |
2 | 758 | 775 | KKRKLGPVPSINGKKKRK |
3 | 759 | 776 | KKRKLGPVPSINGKKKRK |
4 | 771 | 776 | KKKRKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18100.1 | 0.0 | MYB family protein |