PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1283550.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 206aa MW: 23280.4 Da PI: 9.2656

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1283550.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.3	2e-09	13	41	1	29
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar 29 +g+W+++Ed++l+++++++G g+W++ ++ Pd.00g1283550.m01 13 KGAWSKQEDQKLINYIQKHGEGCWNSLPK 41 79***********************9876 PP
2	Myb_DNA-binding	51.2	2.8e-16	47	91	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++ ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++ Pd.00g1283550.m01 47 RGSFGEDEEDLIIRLHALLGNR-WSLIAGRLP-GRTDNEVKNYWNSH 91 899*****************.*****.*********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence
MRKPCCEKTE ITKGAWSKQE DQKLINYIQK HGEGCWNSLP KAADLKRGSF GEDEEDLIIR 60 LHALLGNRWS LIAGRLPGRT DNEVKNYWNS HIRKKLIKMG TTTSSSTALD QKKPHHRDNK 120 VPLLMQPDAR NPILFRPPAT TTDQKRAPNH NDEVDISDSM SINGGNQLQT GVITSNKSFC 180 LPDLNLDLTL SLQLAVGERQ QSDIWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38620.1	4e-50	MYB family protein