PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1281920.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 233aa    MW: 26343.9 Da    PI: 7.3069
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1281920.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.88.1e-1311673595
                       EEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
                 B3 35 tltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
                       t tl+ +sg+ W+v l  + +++r+v+ kGW++Fvk++ L+   f+vF +dg+s+f   v+
  Pd.00g1281920.m01 11 TCTLRGPSGECWTVGL--ELRGDRFVFCKGWQGFVKDQSLEIANFLVFDYDGKSKF--DVT 67
                       679*************..999999***************************99888..444 PP
2B345.51.4e-141342201399
                        TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                 B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgr...yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                        s+   +pk  a + g++k+    +++ed++g sW+vkl+    +    r    ++tkG ++  +an++  gD++vF+l +++++ +++ +fr
  Pd.00g1281920.m01 134 SNAHNIPKALAVAKGLIKK---SVKVEDPNGISWDVKLRLdgkE---HRcdrLFMTKGLSKCFHANNISLGDTLVFELFNTKRGGMKIYIFR 219
                        555679****999999964...5***************995544...44445*************************99999999*****99 PP

                        S CS
                 B3  99 k 99 
                         
  Pd.00g1281920.m01 220 G 220
                        6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MNYVNGRLPP TCTLRGPSGE CWTVGLELRG DRFVFCKGWQ GFVKDQSLEI ANFLVFDYDG  60
KSKFDVTMYD PIGTEKELEP AEKRRGNRAR VEEEIIELET EEPDEESEED ARISNIRKCK  120
SGKRIATDGG KEKSNAHNIP KALAVAKGLI KKSVKVEDPN GISWDVKLRL DGKEHRCDRL  180
FMTKGLSKCF HANNISLGDT LVFELFNTKR GGMKIYIFRG NSNVLLDASN VEY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34400.12e-13B3 family protein