PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1280240.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 337aa    MW: 37221.3 Da    PI: 8.6207
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1280240.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like962.8e-30202254153
            G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 
                        k+r++W+peLH+rF++a++qLGGs+ AtPk+i+elmkv+gLt+++vkSHLQkY
  Pd.00g1280240.m01 202 KQRRNWSPELHRRFLHALQQLGGSHAATPKQIRELMKVDGLTNDEVKSHLQKY 254
                        79*************************************************** PP
2Myb_DNA-binding43.11e-13204254147
                        TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHH CS
    Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqky 47 
                        r +W++e++ ++++a +qlGg    t+k I + m   g+t  ++ks++qky
  Pd.00g1280240.m01 204 RRNWSPELHRRFLHALQQLGGShaaTPKQIRELMKvDGLTNDEVKSHLQKY 254
                        679*****************99****************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MQASRLGFRD YVKALEEERH KIQVFQRELP LCLELVTQAI ERCKQQLSDT TTDYMHGQSE  60
CSEQTSSEGH VFEEFIPLKR TSSSDSDDDE VQESQEPKTN DKDKTNGDKK KSDWLRSAQL  120
WNTTPDPPLK EELPRKALVM EVKRNGGAFQ PFQREKSVGK TNRPVAKVPA SVPATSSTTD  180
TVSGGSGESL KKEEKDGQGQ RKQRRNWSPE LHRRFLHALQ QLGGSHAATP KQIRELMKVD  240
GLTNDEVKSH LQKYPVAATT ASGDAARVAA ANGIYAPVAT SPSTVTPVSP PSLMQRPRPK  300
RPESSHSDER VSHSEGRGHC NSTATSSSTH TTASPVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25550.15e-83G2-like family protein