PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1277860.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 474aa    MW: 52941.1 Da    PI: 5.8578
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1277860.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS465.43.2e-142494711374
               GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                        l++lLl+cA++v++g+le+a+ +L+++s+las dgd+mqR+aayfteALa r+++ +++l +al++++ s   +see+ ++k+f+e+ P+lk
  Pd.00g1277860.m01  49 LIHLLLTCANHVATGSLENANVALEQISQLASADGDTMQRIAAYFTEALADRILKAWPGLHRALNSTKIS--LVSEEFLVQKVFFEMLPFLK 138
                        689*************************************************************999998..79****************** PP

               GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                        +++++aNqaI ea+ege++vH+iD+++ +++QW+aLlq L++Rpegpp+lRiTgv++    +ke l ++++rL+  Ae+l++pf+f + +++
  Pd.00g1277860.m01 139 VAFVLANQAITEAMEGEKMVHVIDLNAAEPAQWIALLQVLSARPEGPPHLRITGVHQ----QKEVLDQMAHRLTVEAEKLDIPFQFCP-IVS 225
                        *********************************************************....9**************************.799 PP

               GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrll......................................................desvsles 222
                        +le+l++e+Lr+k+gEala+++vlqlh+ll                                                      ++++sl+ 
  Pd.00g1277860.m01 226 KLENLDMEKLRIKTGEALAISSVLQLHSLLasddellkkksplasksssgiplprvlqmnqgtlgellekemgngysaspdstsSSPLSLTA 317
                        9********************************************************************************99944444444 PP

               GRAS 223 ..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetl 312
                          + d++L++++sl Pkv+v++eq+++hn+++++er+leal+ y+alfd+le++++r+s er kvE++l+g+ei+n++aceg er+erhe+l
  Pd.00g1277860.m01 318 smKLDSFLNAFWSLTPKVMVITEQDSNHNGSTLMERLLEALYSYAALFDCLESTMSRNSIERLKVEKMLFGEEIKNIIACEGCERKERHEKL 409
                        447799************************************************************************************** PP

               GRAS 313 ekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                        ekW +rl+ aGF++vpls++ + qak+ll+ ++ dgyr+ ee+g++++ W+drpL+svSaWr
  Pd.00g1277860.m01 410 EKWIQRLDLAGFGNVPLSYYGMLQAKRLLQGYGCDGYRMREENGCVLISWQDRPLFSVSAWR 471
                        *************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 474 aa     Download sequence    
MTPMFQDEGS SSATSSPLQF FSMMSLSPSL GSPYPWLKEL KSEERGLYLI HLLLTCANHV  60
ATGSLENANV ALEQISQLAS ADGDTMQRIA AYFTEALADR ILKAWPGLHR ALNSTKISLV  120
SEEFLVQKVF FEMLPFLKVA FVLANQAITE AMEGEKMVHV IDLNAAEPAQ WIALLQVLSA  180
RPEGPPHLRI TGVHQQKEVL DQMAHRLTVE AEKLDIPFQF CPIVSKLENL DMEKLRIKTG  240
EALAISSVLQ LHSLLASDDE LLKKKSPLAS KSSSGIPLPR VLQMNQGTLG ELLEKEMGNG  300
YSASPDSTSS SPLSLTASMK LDSFLNAFWS LTPKVMVITE QDSNHNGSTL MERLLEALYS  360
YAALFDCLES TMSRNSIERL KVEKMLFGEE IKNIIACEGC ERKERHEKLE KWIQRLDLAG  420
FGNVPLSYYG MLQAKRLLQG YGCDGYRMRE ENGCVLISWQ DRPLFSVSAW RCRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein