PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1275630.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NF-YA | ||||||||
Protein Properties | Length: 351aa MW: 38108.4 Da PI: 7.9728 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 102.6 | 3.6e-32 | 175 | 231 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQyq+Il+RRq+Rak+e e+kl +k rkpylheSRh+hA+rR+Rg+gGrF Pd.00g1275630.m01 175 QEPVYVNAKQYQGILRRRQARAKAELERKL-IKVRKPYLHESRHQHAMRRARGTGGRF 231 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 351 aa Download sequence |
MQSKSETENR LHADHHTIPP NSVYSEPWWR GVGYNPISPA VTGRNANNSS SLECPNGGSE 60 SNDDRSLSND EPNEGDDDDA TKDSQITSPR SAGNDGQERQ NVPHVGSTVP TVRDDCLAQP 120 PQLELVGHSI ACASNPYQDP YYAGMMAAYG HQPLGYPPFL GMPHARMPLP LEMAQEPVYV 180 NAKQYQGILR RRQARAKAEL ERKLIKVRKP YLHESRHQHA MRRARGTGGR FAKKTNGDKS 240 NSTGQKKGTG SGPAHSSQSG SSSGSEPFPS DSAETWNSSN SQQEGRGSQV HDVYSAHNYA 300 NGSGCFQTHG GLQASMYPSY SGKRGEEGDC TGQQRGSISS NQASQRRLAI Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12840.1 | 3e-85 | NF-YA family protein |