PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g127280.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 737aa    MW: 83069.4 Da    PI: 9.9793
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g127280.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.83.5e-171952553599
                       EEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  35 tltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                       + +l  +sg +W+v+l  + + ++ ++++GW++Fvk+++L+ gDf+vFk+dg+s+f  +v+++++
  Pd.00g127280.m01 195 KPVLVGPSGIRWTVEL--EERENGLFFQDGWQGFVKDHHLENGDFLVFKYDGESKF--KVTIYDR 255
                       457899**********..**********************************9999..8888886 PP
2B360.23.6e-194635441199
                       HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                       + s+rl++p kf+e+++g+  + ++  l+ +s + W+vkl  + + ++ ++++GW++Fvk++ L++gD +vF+++g+s+f  +vk++++
  Pd.00g127280.m01 463 F-SQRLRIPPKFIENFNGQ--SLRKCALRGPSRQWWDVKL--EERENSLFFRDGWQGFVKDHVLEVGDLLVFSYNGKSKF--KVKIYDR 544
                       4.467********999888..4568***************..********************************998999..9999987 PP
3B339.88.3e-136407181598
                       -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                       r+++p+k a + g+  +    ++l+d++grsW v+l+   +++r  ++ GW e  kan++  gD+++F+l+++    + +++fr
  Pd.00g127280.m01 640 RVTIPNKLAVAEGLRRRD--AVMLQDPTGRSWLVELR-VESRNRLDMAIGWTECRKANQISPGDSIIFELVKQ--DVMQFHIFR 718
                       789******999988544..7***************5.4555669999*********************9863..334667776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 737 aa     Download sequence    
MGGLMPNSEE TTSLMAMCVN TEALAYMIIY GLSAATSTRV SNELGAGNPD KAKKAMAVTL  60
KLSMLLALVL VLTLAVGHNI WAGFFSDSHI IAEQFASMVP LLVISIIVDS VQGVLSGVAR  120
GCGWEHLTVY VNIVTFYLIG MTISSLLGFK FKLHAKGLWI GLTCGLSCQA ATVLYITQST  180
KWTVLDLSDI AEREKPVLVG PSGIRWTVEL EERENGLFFQ DGWQGFVKDH HLENGDFLVF  240
KYDGESKFKV TIYDRTACEK NVKLAERSGC PVSLANKRKA QVKEEIVDCE TRNYNKNCQN  300
KAIVSGRRSG NYVIPGRRPA NDYVVGATST ETVLFKPKYS CFIITFTRKL RCGISIPKEV  360
AVTEGLLSKK SMMIQDPTGR SWPVKLRVRG KLSSCRVDMS TEARKQVKVR TAKQDQSLKY  420
LNLWQQKSEN KTWLVLLTKI QMARPRKRSP KKPSFFKILI GDFSQRLRIP PKFIENFNGQ  480
SLRKCALRGP SRQWWDVKLE ERENSLFFRD GWQGFVKDHV LEVGDLLVFS YNGKSKFKVK  540
IYDRSACEKN VEVAERRSGS PVPLVNKGNQ AQVKDEIVEL DTEDCENKTI YSDRRSCKYP  600
ISEKRPVSFC VQETSTGSIL FKSENPCFLV CSRKRYLLYR VTIPNKLAVA EGLRRRDAVM  660
LQDPTGRSWL VELRVESRNR LDMAIGWTEC RKANQISPGD SIIFELVKQD VMQFHIFRGA  720
VGGNRLSVIT AAPNVKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.12e-21B3 family protein