PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g127240.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 233aa MW: 26353 Da PI: 7.3727 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 41.5 | 2.4e-13 | 11 | 67 | 35 | 95 |
EEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 35 tltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 t tl+ +sg+ W+v l + +++r+v+ kGW++Fvk++ L+ f+vF +dg+s+f v+ Pd.00g127240.m01 11 TCTLRGPSGECWTVGL--ELRGDRFVFCKGWQGFVKDHSLEIANFLVFDYDGKSKF--DVT 67 679*************..999999***************************99888..444 PP | |||||||
2 | B3 | 45.5 | 1.4e-14 | 134 | 220 | 13 | 99 |
TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgr...yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 s+ +pk a + g++k+ +++ed++g sW+vkl+ + r ++tkG ++ +an++ gD++vF+l +++++ +++ +fr Pd.00g127240.m01 134 SNAHNIPKALAVAKGLIKK---SVKVEDPNGISWDVKLRLdgkE---HRcdrLFMTKGLSKCFHANNISLGDTLVFELFNTKRGGMKIYIFRG 220 555679****999999964...5***************995544...44445*************************99999999*****996 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 233 aa Download sequence |
MNYVNGRLPP TCTLRGPSGE CWTVGLELRG DRFVFCKGWQ GFVKDHSLEI ANFLVFDYDG 60 KSKFDVTMYD PIGTEKELEP AEKRRGNRAR VEEEIIELET EEPDEESEED ARISNIRKCK 120 SGKRIATDGG KEKSNAHNIP KALAVAKGLI KKSVKVEDPN GISWDVKLRL DGKEHRCDRL 180 FMTKGLSKCF HANNISLGDT LVFELFNTKR GGMKIYIFRG NSNVLLDASN VEY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G34400.1 | 2e-13 | B3 family protein |