PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1271710.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 615aa    MW: 67616.2 Da    PI: 5.0731
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1271710.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS454.37.4e-1392476061374
               GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                        lv+ L++cAeav++++l+la+al++++  la +++ +m+++a+yf+eALa+r++r    +y    p++    ++s + + +  f+e++P+lk
  Pd.00g1271710.m01 247 LVHGLMACAEAVQQNNLNLAKALVTQIGYLAISQAGAMRKVATYFAEALAQRIFR----VY----PQSPI--DHSFSDMLQMHFYETCPYLK 328
                        6899***************************************************....44....33333..23444444556********* PP

               GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                        f+h+taNqaIlea++g++rvH+iDf+++qG+QWpaL+qaLa Rp+g+p +R+Tg+g+p+s++++ l+e+g++La++Ae+++v+fe++ +va+
  Pd.00g1271710.m01 329 FAHFTANQAILEALQGKTRVHVIDFSMNQGMQWPALMQALALRPGGSPAFRLTGIGPPASDNSDHLQEVGWKLAQLAETIHVEFEYRGFVAN 420
                        ******************************************************************************************** PP

               GRAS 185 rledleleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
                        +l+dl+ ++L+++p   E++aVn+v++lh+ll++++++e+    vL++vk+++P++v+vveqea+hn++ F++rf e+l+yys+lfdsle +
  Pd.00g1271710.m01 421 SLADLDASMLELRPseVESVAVNSVFELHKLLARPGAIEK----VLSVVKQMKPEIVTVVEQEANHNGPVFMDRFNESLHYYSTLFDSLEGS 508
                        **************88899*********************....************************************************ PP

               GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdr 365
                        +   +++++ +++ +lg++i+nvvaceg +r+erhetl++Wr rl++aGF pv+l+++a kqa++ll+ ++ +dgyrvee++g+l+lgW++r
  Pd.00g1271710.m01 509 V---NSQDKAMSELYLGKQICNVVACEGVDRVERHETLAQWRTRLDSAGFVPVHLGSNAFKQASMLLALFAgGDGYRVEENNGCLMLGWHTR 597
                        7...88889999999***************************************************************************** PP

               GRAS 366 pLvsvSaWr 374
                        pL+++SaW+
  Pd.00g1271710.m01 598 PLIATSAWK 606
                        ********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 615 aa     Download sequence    
MASTSAGDCG KASNKMWEED AQRIDGGMDE LLAVLGYKVR SSDMAEVAQK LEQLEEFMGS  60
VQEDGLSQLA SDTVHYNPSD LSTWLESMIS EINPPPDFNP LMAAAAVPLP NQQQQVQLGD  120
DSFLAPAESS TITSIDFRDQ QMSKSLSPPP PQTQNHHPHH QVVFDDCNSS SNYYDLKATM  180
FTQTHHDSSS REAKRLKPSS GSSASDLVFN RPTASSLPQP QPLSIPTTES STRPALLVDS  240
QENGVRLVHG LMACAEAVQQ NNLNLAKALV TQIGYLAISQ AGAMRKVATY FAEALAQRIF  300
RVYPQSPIDH SFSDMLQMHF YETCPYLKFA HFTANQAILE ALQGKTRVHV IDFSMNQGMQ  360
WPALMQALAL RPGGSPAFRL TGIGPPASDN SDHLQEVGWK LAQLAETIHV EFEYRGFVAN  420
SLADLDASML ELRPSEVESV AVNSVFELHK LLARPGAIEK VLSVVKQMKP EIVTVVEQEA  480
NHNGPVFMDR FNESLHYYST LFDSLEGSVN SQDKAMSELY LGKQICNVVA CEGVDRVERH  540
ETLAQWRTRL DSAGFVPVHL GSNAFKQASM LLALFAGGDG YRVEENNGCL MLGWHTRPLI  600
ATSAWKPGCD SVMAH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.10.0GRAS family protein