PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1270480.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 373aa MW: 40923.3 Da PI: 6.8323

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1270480.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	72.9	4.5e-23	188	232	2	46
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehv 46 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+h+ Pd.00g1270480.m02 188 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHM 232 9*****************************************996 PP
2	Myb_DNA-binding	29.4	1.8e-09	189	231	1	39
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkq 39 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl + Pd.00g1270480.m02 189 RMRWTSTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAH 231 89*********************************99999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MPLEGIFIEP SSTTTSPLPD LSLHISPPNT SSSSSSIFNT TSGEPQISTT NSQAHTELSL 60 GRRFTGGTHE EPPQKPYHHH QQQSLPLYRS SNHLSHINNG VSLLDVSSSS GLRPIKGIPV 120 YQNRPFPFLP TENMIPRDHP KDSKMCFYQR PPPSYNLPSL PSASCSSNTP STPYFGGGLD 180 PMSSMRAPRM RWTSTLHARF VHAVELLGGH ERATPKSVLE LMDVKDLTLA HMYRTVKTTD 240 KPAASSDGSG EDDILSPIGS ATDLHGLRSP NQFPEQRGPS DRSSVQPDLD YTSSTTLWSN 300 SSSSREAFPH TSSHDMDGLT PVSSQLQKIS GHQIQECDST THLKSYLGSN FETRNPSLEF 360 TLGRPDWNGK PHD

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MPLEGIFIEP SSTTTSPLPD LSLHISPPNT SSSSSSIFNT TSGEPQISTT NSQAHTELSL  60
GRRFTGGTHE EPPQKPYHHH QQQSLPLYRS SNHLSHINNG VSLLDVSSSS GLRPIKGIPV  120
YQNRPFPFLP TENMIPRDHP KDSKMCFYQR PPPSYNLPSL PSASCSSNTP STPYFGGGLD  180
PMSSMRAPRM RWTSTLHARF VHAVELLGGH ERATPKSVLE LMDVKDLTLA HMYRTVKTTD  240
KPAASSDGSG EDDILSPIGS ATDLHGLRSP NQFPEQRGPS DRSSVQPDLD YTSSTTLWSN  300
SSSSREAFPH TSSHDMDGLT PVSSQLQKIS GHQIQECDST THLKSYLGSN FETRNPSLEF  360
TLGRPDWNGK PHD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	1e-47	G2-like family protein