PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1268930.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Nin-like

Protein Properties

Length: 870aa MW: 96936.4 Da PI: 6.6799

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1268930.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.1	4.3e-29	592	643	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek i+le+l+kyFs+++kdAA+++gvc T+LKriCRq+GIkRWP+Rkik++ Pd.00g1268930.m01 592 AEKAITLEVLRKYFSGSLKDAANSIGVCSTTLKRICRQHGIKRWPSRKIKKV 643 5899**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 870 aa Download sequence
MDDDVLSPAT MMGAQPDSAT DLDFMDELFL EGCWLETTDG PEFPNQSHAN SGAHLNPSVF 60 WHTLEANGNL TMNPSENSNQ EVIQTPFFKQ LHEGPVNPQF PSQNMIDVDG YSGHSADPTI 120 KSYELNRRWW IGPLGNQDPA SSVMERLMRA LVCIRDVMRD KNVLVQVWVP VNKGGRNVLT 180 TNDDLFSLDS SCPRLSKYRD ISVKYQFSTG EDSAELVKGL PGRVFSGQVP EWTPDVRFFR 240 SDEYPRVDYA QCYDVRGTVA LPIFEQGSRT CLGVIEVVTT TQKIKYQLEL ESVCKALEAV 300 DLQSSRNWST QNVKGCVKPY QAALPEIQEV LRSACETHKL PLAQTWVSCI QQGKDGCRHS 360 DDNYVHCVST VDHAFHVTDP YIEGFHEACS EHHLLKGQGI VGKAFMTNQP CFSDDITSCV 420 KTEYPLSHHA RMFGLHAAVA IRLRSMKTGS TDFVLEFFLP VECRDPEEQK KMLNSLSIII 480 QQICRSLRVV TDKELEEESD FPVSEMIVSS DPRPSGIASF TEVQLSGNDV SIFPMENPRE 540 VLGVKSSKLR QHQPDSNLKV GVECGRECSA LGEGSFSSVG VSKTREKRRT KAEKAITLEV 600 LRKYFSGSLK DAANSIGVCS TTLKRICRQH GIKRWPSRKI KKVGHSLQKL QLVIDSVEGA 660 SGAFQINSFY TNFPELTSPN LSGTSPFSTS KLSDQPKPTN LSPEGVVVSP QATASKSPSS 720 SCSQSSSSSQ CCSSRTQQHR PTCNVTGDDD PIVGDNSGDG VLKRVRSEAE LHAFGQDRTQ 780 LLPRSQSHKI LNELQKLQPI PPSLKNNGVA QEGEVQRVKV AYGDEKTRFR MQNDWRYEDL 840 VQEIAKRFNR HRAIQLSSLS IFLVIIWKGL

Sequence ? help Back to Top

Protein Sequence Length: 870 aa Download sequence

MDDDVLSPAT MMGAQPDSAT DLDFMDELFL EGCWLETTDG PEFPNQSHAN SGAHLNPSVF  60
WHTLEANGNL TMNPSENSNQ EVIQTPFFKQ LHEGPVNPQF PSQNMIDVDG YSGHSADPTI  120
KSYELNRRWW IGPLGNQDPA SSVMERLMRA LVCIRDVMRD KNVLVQVWVP VNKGGRNVLT  180
TNDDLFSLDS SCPRLSKYRD ISVKYQFSTG EDSAELVKGL PGRVFSGQVP EWTPDVRFFR  240
SDEYPRVDYA QCYDVRGTVA LPIFEQGSRT CLGVIEVVTT TQKIKYQLEL ESVCKALEAV  300
DLQSSRNWST QNVKGCVKPY QAALPEIQEV LRSACETHKL PLAQTWVSCI QQGKDGCRHS  360
DDNYVHCVST VDHAFHVTDP YIEGFHEACS EHHLLKGQGI VGKAFMTNQP CFSDDITSCV  420
KTEYPLSHHA RMFGLHAAVA IRLRSMKTGS TDFVLEFFLP VECRDPEEQK KMLNSLSIII  480
QQICRSLRVV TDKELEEESD FPVSEMIVSS DPRPSGIASF TEVQLSGNDV SIFPMENPRE  540
VLGVKSSKLR QHQPDSNLKV GVECGRECSA LGEGSFSSVG VSKTREKRRT KAEKAITLEV  600
LRKYFSGSLK DAANSIGVCS TTLKRICRQH GIKRWPSRKI KKVGHSLQKL QLVIDSVEGA  660
SGAFQINSFY TNFPELTSPN LSGTSPFSTS KLSDQPKPTN LSPEGVVVSP QATASKSPSS  720
SCSQSSSSSQ CCSSRTQQHR PTCNVTGDDD PIVGDNSGDG VLKRVRSEAE LHAFGQDRTQ  780
LLPRSQSHKI LNELQKLQPI PPSLKNNGVA QEGEVQRVKV AYGDEKTRFR MQNDWRYEDL  840
VQEIAKRFNR HRAIQLSSLS IFLVIIWKGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20640.2	0.0	Nin-like family protein