PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g1264100.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | NF-YB | ||||||||
Protein Properties | Length: 185aa MW: 20730.4 Da PI: 4.5696 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 180.1 | 2e-56 | 59 | 154 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 reqdrflPianvsrimk +l anakiskdaketvqecvsefisfvt+easdkcqrekrktingddllwa++tlGfe+yveplkvyl+kyrel Pd.00g1264100.m01 59 REQDRFLPIANVSRIMKMALQANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQKYREL 150 89****************************************************************************************** PP NF-YB 94 egek 97 egek Pd.00g1264100.m01 151 EGEK 154 *997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 185 aa Download sequence |
MHYYPSRSNG PQHLCLSSLI ALRRSPSETP KTPDMADSDN DSGGNNDGSQ AQSGELSARE 60 QDRFLPIANV SRIMKMALQA NAKISKDAKE TVQECVSEFI SFVTGEASDK CQREKRKTIN 120 GDDLLWAMTT LGFEEYVEPL KVYLQKYREL EGEKMTMGGR DKDMEELGLG IVEVQVMVEM 180 VELQL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G14540.1 | 3e-69 | NF-YB family protein |